C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076219 D19Bwg1357e-201 ENSMUSG00000041360 10090 - 19:27388702-27429820 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076219
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076219 7.059±2.60 4.051±1.72 7.280±0.94 8.326±3.49 3.750±1.94 4.563±0.63 3.727±0.54 5.185±0.15 4.332±1.65 6.367±0.62 2.375±0.34 13.249±5.11 18.164±13.52 2.830±2.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UU CIL_0005UU_0003 CGP 19:27322588-27429820
CIL_0000NH CIL_0000NH_0002 CGP 19:27388702-28011166

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005730 IEA nucleolus
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000397885 KIAA0020-001 protein_coding Homo_sapiens 0 2108
ENST00000469168 KIAA0020-002 processed_transcript Homo_sapiens 0 316
ENST00000565135 RP11-452D12.1-001 processed_pseudogene Homo_sapiens 0 1426

Loading