C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: KIAA0020
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000397885 KIAA0020-001 ENSG00000080608 9606 - 9:2804164-2844241 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397885 5.397±0.00 8.992±0.00 2.322±0.00 2.028±0.26 5.754±0.12 4.053±2.31 1.996±0.75 4.878±3.68 3.884±0.34 5.340±2.28 2.090±1.73 9.214±4.92 5.586±1.84 10.101±0.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051I CIL_00051I_0002 CGP 9:2621834-2730037
CIL_0005UU CIL_0005UU_0002 CGP 9:2717502-2844241
CIL_0000NH CIL_0000NH_0001 CGP 9:2720469-3526004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005488 IEA binding
GO:0005730 IDA nucleolus
GO:0005783 IDA endoplasmic reticulum
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076219 D19Bwg1357e-201 protein_coding Mus_musculus 0 2108
ENSMUST00000118416 Gm8522-001 processed_pseudogene Mus_musculus 0 1664

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