C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 10
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076316 Arhgap10-201 ENSMUSG00000037148 10090 - 8:77250366-77517907 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076316
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076316 7.315±3.36 11.014±1.63 16.445±2.14 1.801±0.54 5.568±1.49 3.135±1.75 6.654±0.96 10.274±4.21 1.649±1.50 5.821±0.44 10.959±2.29 18.088±4.36 48.855±25.02 2.528±0.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007S9 CIL_0007S9_0002 VISTA 8:76966899-77570239

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005100 IPI Rho GTPase activator activity
GO:0005515 IPI protein binding
GO:0005829 IMP cytosol
GO:0005886 IEA plasma membrane
GO:0007010 IMP cytoskeleton organization
GO:0007165 IEA signal transduction
GO:0032321 IPI positive regulation of Rho GTPase activity
GO:0043066 IMP negative regulation of apoptotic process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000336498 ARHGAP10-001 protein_coding Homo_sapiens 0 2691
ENST00000506020 ARHGAP10-005 retained_intron Homo_sapiens 0 1075
ENST00000506054 ARHGAP10-003 retained_intron Homo_sapiens 0 1934
ENST00000507661 ARHGAP10-004 protein_coding Homo_sapiens 0 1214
ENST00000510379 ARHGAP10-002 retained_intron Homo_sapiens 0 643

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