C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007S9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2100 VISTA 9606 4:147752009-148356122
GeneTranscriptPositionBiotype
ENSG00000071205 (ARHGAP10)
Rho GTPase activating protein 10 		ENST00000336498 (ARHGAP10-001) 147732063-148072780 protein_coding
ENST00000506020 (ARHGAP10-005) 147946239-148072776 retained_intron
ENST00000506054 (ARHGAP10-003) 147860983-148072776 retained_intron
ENST00000507661 (ARHGAP10-004) 147881867-148072775 protein_coding
ENST00000510076 (ARHGAP10-007) 148065240-148072376 processed_transcript
ENST00000510379 (ARHGAP10-002) 147732063-147858488 retained_intron
ENST00000513548 (ARHGAP10-006) 148023054-148063277 retained_intron
ENSG00000151623 (NR3C2)
nuclear receptor subfamily 3, group C, member 2 		ENST00000342437 (NR3C2-002) 148080867-148442371 nonsense_mediated_decay
ENST00000344721 (NR3C2-001) 148078762-148444698 protein_coding
ENST00000358102 (NR3C2-003) 148078769-148442520 protein_coding
ENST00000503174 (NR3C2-008) 148152417-148154844 retained_intron
ENST00000503313 (NR3C2-007) 148146588-148201132 processed_transcript
ENST00000504753 (NR3C2-006) 148194771-148368470 processed_transcript
ENST00000511528 (NR3C2-009) 148081344-148436860 protein_coding
ENST00000512865 (NR3C2-004) 148080193-148442224 protein_coding
ENSG00000240014 (RN7SL254P)
RNA, 7SL, cytoplasmic 254, pseudogene 		ENST00000460609 (RN7SL254P-201) 147808926-147809209 misc_RNA
ENSG00000250354 (RP11-76G10.1)
 ENST00000514843 (RP11-76G10.1-001) 148146471-148208880 antisense
ENSG00000270387 (RP11-315D13.1)
 ENST00000604653 (RP11-315D13.1-001) 147916529-147917386 processed_pseudogene
CIL_0007S9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs2100 VISTA 10090 8:76966899-77570239
GeneTranscriptPositionBiotype
ENSMUSG00000031618 (Nr3c2)
nuclear receptor subfamily 3, group C, member 2 		ENSMUST00000034031 (Nr3c2-005) 76908272-77242530 protein_coding
ENSMUST00000109911 (Nr3c2-004) 76902476-77243663 protein_coding
ENSMUST00000109912 (Nr3c2-002) 76902288-77245007 protein_coding
ENSMUST00000109913 (Nr3c2-001) 76899772-77245012 protein_coding
ENSMUST00000126697 (Nr3c2-007) 77128013-77185872 processed_transcript
ENSMUST00000128862 (Nr3c2-008) 76902347-76908656 protein_coding
ENSMUST00000143284 (Nr3c2-006) 76899442-76908413 protein_coding
ENSMUST00000148106 (Nr3c2-003) 76902288-77242996 nonsense_mediated_decay
ENSMUSG00000037134 (Prmt10)
protein arginine methyltransferase 10 (putative) 		ENSMUST00000056237 (Prmt10-201) 77549397-77581338 protein_coding
ENSMUST00000118622 (Prmt10-001) 77549410-77581338 protein_coding
ENSMUST00000142824 (Prmt10-002) 77549407-77563978 retained_intron
ENSMUST00000156753 (Prmt10-003) 77563662-77565093 retained_intron
ENSMUSG00000037148 (Arhgap10)
Rho GTPase activating protein 10 		ENSMUST00000076316 (Arhgap10-201) 77250366-77517907 protein_coding
ENSMUSG00000087750 (Gm23468)
predicted gene, 23468 		ENSMUST00000157125 (Gm23468-201) 77569495-77569602 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007S9_0001ENSG00000071205ENST00000336498ENST00000506020ENST00000506054ENST00000507661ENST00000510076ENST00000510379ENST00000513548ENSG00000151623ENST00000342437ENST00000344721ENST00000358102ENST00000503174ENST00000503313ENST00000504753ENST00000511528ENST00000512865ENSG00000240014ENST00000460609ENSG00000250354ENST00000514843ENSG00000270387ENST00000604653CIL_0007S9_0002ENSMUSG00000031618ENSMUST00000034031ENSMUST00000109911ENSMUST00000109912ENSMUST00000109913ENSMUST00000126697ENSMUST00000128862ENSMUST00000143284ENSMUST00000148106ENSMUSG00000037134ENSMUST00000056237ENSMUST00000118622ENSMUST00000142824ENSMUST00000156753ENSMUSG00000037148ENSMUST00000076316ENSMUSG00000087750ENSMUST00000157125
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007S9_0001ENSG00000071205ENST00000336498ENST00000506054ENST00000507661ENSG00000151623ENST00000342437ENST00000344721ENST00000358102ENST00000511528ENSG00000240014ENST00000460609ENSG00000250354ENST00000514843ENSG00000270387ENST00000604653CIL_0007S9_0002ENSMUSG00000031618ENSMUST00000034031ENSMUST00000109911ENSMUST00000109912ENSMUST00000109913ENSMUST00000126697ENSMUST00000128862ENSMUST00000148106ENSMUSG00000037134ENSMUST00000056237ENSMUST00000118622ENSMUST00000142824ENSMUSG00000037148ENSMUST00000076316ENSMUSG00000087750ENSMUST00000157125
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000071205 ENST00000336498 8.191±0.00 4.524±0.00 0.510±0.00 3.250±2.30 6.210±3.90 12.432±0.00 9.231±1.67 2.589±0.00 14.357±13.47 3.393±0.00 7.643±4.44 6.618±1.71 7.168±3.73 10.094±4.18
ENST00000506020 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506054 N/A N/A 0.269±0.00 0.079±0.00 0.573±0.00 0.896±0.00 0.868±0.00 0.113±0.00 3.852±0.00 N/A N/A N/A N/A N/A
ENST00000507661 2.629±0.00 3.572±0.00 N/A 0.396±0.00 5.433±0.00 8.075±0.00 2.928±0.00 3.055±0.00 N/A 2.310±0.00 5.913±0.00 4.553±2.56 3.263±0.84 3.982±0.52
ENST00000510076 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513548 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000151623 ENST00000342437 N/A N/A 4.699±0.00 N/A N/A 5.295±0.00 N/A N/A N/A 0.568±0.00 1.520±0.00 N/A 0.197±0.00 1.610±0.00
ENST00000344721 0.527±0.00 N/A N/A N/A N/A N/A N/A N/A 0.770±0.38 N/A N/A N/A N/A N/A
ENST00000358102 0.502±0.00 N/A 2.186±0.00 3.391±0.89 0.466±0.00 1.501±0.72 2.163±0.56 0.890±0.00 1.463±0.85 N/A 0.606±0.00 1.839±0.95 0.457±0.11 N/A
ENST00000503174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503313 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511528 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.425±0.00 N/A 1.628±0.00
ENST00000512865 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000240014 ENST00000460609 N/A 0.065±0.00 N/A N/A N/A N/A 0.133±0.07 N/A 1.130±0.00 N/A N/A N/A N/A N/A
ENSG00000250354 ENST00000514843 N/A 0.046±0.00 N/A 0.073±0.00 0.138±0.09 N/A N/A N/A N/A N/A N/A 0.360±0.00 N/A N/A
ENSG00000270387 ENST00000604653 N/A 0.122±0.00 0.241±0.00 0.057±0.00 0.515±0.00 N/A 0.651±0.48 0.674±0.00 1.508±0.00 N/A N/A 0.094±0.05 N/A 0.047±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031618 ENSMUST00000034031 0.577±0.21 1.087±0.43 N/A 0.215±0.03 2.006±0.63 4.826±0.00 1.027±0.18 1.336±0.64 0.590±0.27 1.466±0.42 N/A 0.893±0.41 N/A 0.402±0.18
ENSMUST00000109911 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.00 0.053±0.00 N/A
ENSMUST00000109912 0.944±0.13 0.787±0.24 3.072±0.32 1.427±1.86 0.849±0.26 9.918±1.64 1.956±0.17 2.223±0.64 0.651±0.55 1.786±0.41 1.028±0.34 0.767±0.36 0.424±0.35 0.112±0.07
ENSMUST00000109913 N/A 1.574±0.41 N/A 0.075±0.00 0.486±0.20 2.942±0.00 0.453±0.06 0.484±0.01 0.362±0.18 0.611±0.20 0.223±0.02 0.337±0.14 N/A 0.139±0.00
ENSMUST00000126697 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.547±0.00
ENSMUST00000128862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.829±0.00
ENSMUST00000143284 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.229±0.00 N/A 0.246±0.00
ENSMUSG00000037134 ENSMUST00000056237 5.401±3.06 4.246±0.00 4.711±0.48 5.715±1.77 4.382±0.44 2.946±0.00 2.774±0.27 3.695±0.69 4.029±0.49 4.188±1.30 2.793±0.48 6.232±1.98 6.107±1.55 1.827±0.11
ENSMUST00000118622 5.050±1.54 9.203±5.05 N/A 0.704±0.00 4.869±2.64 3.647±1.20 2.280±0.00 2.651±1.87 4.269±0.24 4.310±2.09 N/A 8.244±2.36 0.916±0.00 1.742±0.46
ENSMUST00000142824 N/A 1.152±0.00 N/A 1.213±0.12 0.619±0.00 0.407±0.08 0.231±0.04 0.421±0.00 0.340±0.00 0.740±0.04 N/A 1.366±0.50 N/A 0.143±0.05
ENSMUST00000156753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037148 ENSMUST00000076316 7.315±3.36 11.014±1.63 16.445±2.14 1.801±0.54 5.568±1.49 3.135±1.75 6.654±0.96 10.274±4.21 1.649±1.50 5.821±0.44 10.959±2.29 18.088±4.36 48.855±25.02 2.528±0.77
ENSMUSG00000087750 ENSMUST00000157125 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 37.198±21.29 78.256±0.00 N/A

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