C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquilin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076454 Ubqln1-202 ENSMUSG00000005312 10090 - 13:58176156-58215653 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076454
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076454 36.616±1.78 99.037±35.26 12.745±2.06 22.253±8.02 58.699±32.19 52.780±5.44 11.378±1.30 28.102±5.72 22.653±12.26 36.282±11.35 6.618±1.11 79.996±39.67 14.169±5.01 21.886±9.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006F5 CIL_0006F5_0002 CGP 13:58157649-58215653
CIL_0000XO CIL_0000XO_0002 CGP 13:58176156-58274188

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000502 IEA proteasome complex
GO:0005102 NAS receptor binding
GO:0005737 ISS cytoplasm
GO:0005783 ISS endoplasmic reticulum
GO:0019215 NAS intermediate filament binding
GO:0019900 ISS kinase binding
GO:0031396 ISS regulation of protein ubiquitination
GO:0048471 ISS perinuclear region of cytoplasm
GO:0071456 ISS cellular response to hypoxia
GO:1902175 ISS regulation of oxidative stress-induced intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000257468 UBQLN1-002 protein_coding Homo_sapiens 0 1816
ENST00000338222 UBQLN2-001 protein_coding Homo_sapiens 0 250
ENST00000376395 UBQLN1-001 protein_coding Homo_sapiens 0 1188
ENST00000526134 UBQLN1-006 protein_coding Homo_sapiens 0 250
ENST00000527373 UBQLN1-005 retained_intron Homo_sapiens 0 237
ENST00000533705 UBQLN1-003 retained_intron Homo_sapiens 0 944

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