C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: stathmin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076622 Stmnd1-201 ENSMUSG00000063529 10090 + 13:46273721-46300115 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076622
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076622 0.496±0.44 0.354±0.06 0.026±0.02 0.091±0.05 0.158±0.06 0.191±0.11 0.058±0.03 0.013±0.01 1.698±0.21 0.087±0.03 2.170±1.13 0.078±0.07 0.174±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0002 VISTA 13:46271320-46874349
CIL_0008JF CIL_0008JF_0002 VISTA 13:46271337-46874342
CIL_0003RR CIL_0003RR_0002 CGP 13:46273721-46431090

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0031110 IEA regulation of microtubule polymerization or depolymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000354384 STMND1-001 protein_coding Homo_sapiens 0 398
ENST00000366215 STMND1-002 retained_intron Homo_sapiens 0 196
ENST00000536551 STMND1-201 protein_coding Homo_sapiens 0 442

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