C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003RR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000230873-ENSG00000112183 CGP 9606 6:17102258-17293875
GeneTranscriptPositionBiotype
ENSG00000112183 (RBM24)
RNA binding motif protein 24 		ENST00000318204 (RBM24-002) 17282701-17293866 protein_coding
ENST00000379052 (RBM24-001) 17281346-17293875 protein_coding
ENST00000425446 (RBM24-008) 17282064-17292454 protein_coding
ENST00000503965 (RBM24-009) 17282337-17292136 protein_coding
ENST00000504055 (RBM24-007) 17283044-17292217 processed_transcript
ENST00000508508 (RBM24-006) 17289969-17293023 processed_transcript
ENST00000509686 (RBM24-004) 17281705-17293030 protein_coding
ENST00000510826 (RBM24-005) 17289855-17292763 processed_transcript
ENSG00000230873 (STMND1)
stathmin domain containing 1 		ENST00000354384 (STMND1-001) 17110495-17130675 protein_coding
ENST00000366215 (STMND1-002) 17127938-17131372 retained_intron
ENST00000536551 (STMND1-201) 17102258-17131372 protein_coding
CIL_0003RR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000063529-ENSMUSG00000038132 CGP 10090 13:46273721-46431090
GeneTranscriptPositionBiotype
ENSMUSG00000038132 (Rbm24)
RNA binding motif protein 24 		ENSMUST00000037923 (Rbm24-201) 46418300-46431090 protein_coding
ENSMUSG00000063529 (Stmnd1)
stathmin domain containing 1 		ENSMUST00000076622 (Stmnd1-201) 46273721-46300115 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RR_0001ENSG00000112183ENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000504055ENST00000508508ENST00000509686ENST00000510826ENSG00000230873ENST00000354384ENST00000366215ENST00000536551CIL_0003RR_0002ENSMUSG00000038132ENSMUST00000037923ENSMUSG00000063529ENSMUST00000076622
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003RR_0001ENSG00000112183ENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000508508ENST00000509686ENST00000510826ENSG00000230873ENST00000354384ENST00000366215ENST00000536551CIL_0003RR_0002ENSMUSG00000038132ENSMUST00000037923ENSMUSG00000063529ENSMUST00000076622
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112183 ENST00000318204 0.130±0.00 N/A 0.256±0.00 1.293±0.00 N/A N/A 4.537±0.00 0.252±0.00 N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000379052 0.474±0.00 N/A N/A 0.472±0.00 1.338±0.00 1.005±0.91 7.797±3.47 0.440±0.00 0.024±0.00 0.319±0.00 12.168±0.00 0.705±0.19 0.225±0.00 2.779±1.98
ENST00000425446 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503965 N/A N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508508 N/A N/A 0.135±0.00 0.778±0.00 N/A 1.667±1.14 9.771±0.00 N/A 0.818±0.75 1.343±0.00 27.676±0.00 0.940±0.35 0.027±0.00 N/A
ENST00000509686 0.596±0.00 N/A N/A 1.487±0.00 2.304±0.00 N/A 19.878±0.00 N/A N/A 1.605±0.00 40.090±0.00 0.860±0.00 0.367±0.00 2.923±0.00
ENST00000510826 N/A N/A N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A 1.663±0.00 0.263±0.00 5.572±0.00
ENSG00000230873 ENST00000354384 0.088±0.00 0.408±0.00 N/A 0.102±0.00 0.037±0.00 0.165±0.00 0.029±0.00 0.048±0.00 N/A N/A N/A N/A 0.083±0.00 N/A
ENST00000366215 0.031±0.00 0.073±0.00 N/A 0.045±0.01 0.019±0.00 0.268±0.00 0.050±0.00 0.024±0.00 0.050±0.00 0.278±0.04 0.009±0.00 0.108±0.00 N/A N/A
ENST00000536551 N/A N/A N/A 0.031±0.00 0.066±0.00 0.054±0.00 N/A N/A N/A 2.182±1.68 N/A 2.870±2.40 N/A 4.086±0.18
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038132 ENSMUST00000037923 7.803±7.85 5.271±0.42 13.989±1.10 2.121±0.84 6.011±6.48 1.772±0.55 55.009±7.92 0.495±0.02 0.040±0.04 3.169±0.91 50.869±4.86 5.965±3.98 0.068±0.09 0.193±0.08
ENSMUSG00000063529 ENSMUST00000076622 0.496±0.44 N/A 0.354±0.06 0.026±0.02 0.091±0.05 0.158±0.06 0.191±0.11 0.058±0.03 0.013±0.01 1.698±0.21 0.087±0.03 2.170±1.13 0.078±0.07 0.174±0.08

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