C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0009C9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm132 VISTA 9606 6:17172901-17774881
GeneTranscriptPositionBiotype
ENSG00000112183 (RBM24)
RNA binding motif protein 24 		ENST00000318204 (RBM24-002) 17282701-17293866 protein_coding
ENST00000379052 (RBM24-001) 17281346-17293875 protein_coding
ENST00000425446 (RBM24-008) 17282064-17292454 protein_coding
ENST00000503965 (RBM24-009) 17282337-17292136 protein_coding
ENST00000504055 (RBM24-007) 17283044-17292217 processed_transcript
ENST00000508508 (RBM24-006) 17289969-17293023 processed_transcript
ENST00000509686 (RBM24-004) 17281705-17293030 protein_coding
ENST00000510826 (RBM24-005) 17289855-17292763 processed_transcript
ENSG00000112186 (CAP2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENST00000229922 (CAP2-001) 17393216-17557792 protein_coding
ENST00000378990 (CAP2-006) 17393645-17556795 protein_coding
ENST00000465994 (CAP2-007) 17393712-17556568 protein_coding
ENST00000476263 (CAP2-008) 17393732-17539290 nonsense_mediated_decay
ENST00000479291 (CAP2-005) 17393712-17551570 nonsense_mediated_decay
ENST00000489374 (CAP2-003) 17393633-17556659 protein_coding
ENST00000493172 (CAP2-004) 17393663-17556564 protein_coding
ENST00000611958 (CAP2-201) 17393595-17557790 protein_coding
ENST00000616440 (CAP2-202) 17393505-17557790 protein_coding
ENSG00000124789 (NUP153)
nucleoporin 153kDa 		ENST00000262077 (NUP153-001) 17615038-17706387 protein_coding
ENST00000537253 (NUP153-201) 17615035-17706834 protein_coding
ENST00000613258 (NUP153-202) 17615035-17706834 protein_coding
ENSG00000137177 (KIF13A)
kinesin family member 13A 		ENST00000259711 (KIF13A-001) 17763693-17987569 protein_coding
ENST00000358380 (KIF13A-003) 17770365-17817200 protein_coding
ENST00000378814 (KIF13A-005) 17759183-17987463 protein_coding
ENST00000378826 (KIF13A-002) 17763695-17987482 protein_coding
ENST00000378843 (KIF13A-004) 17763695-17987481 protein_coding
ENST00000502297 (KIF13A-006) 17759254-17794697 protein_coding
ENST00000502704 (KIF13A-008) 17950406-17987623 protein_coding
ENST00000503342 (KIF13A-011) 17812044-17817190 processed_transcript
ENST00000505588 (KIF13A-010) 17873263-17987077 retained_intron
ENST00000506044 (KIF13A-013) 17780760-17796790 protein_coding
ENST00000507576 (KIF13A-009) 17855477-17987551 processed_transcript
ENST00000514714 (KIF13A-012) 17785593-17795032 processed_transcript
ENSG00000137414 (FAM8A1)
family with sequence similarity 8, member A1 		ENST00000259963 (FAM8A1-001) 17600355-17611719 protein_coding
ENSG00000184612 (RPL7P26)
ribosomal protein L7 pseudogene 26 		ENST00000333817 (RPL7P26-001) 17530899-17531652 processed_pseudogene
ENSG00000201442 (Y_RNA)
Y RNA 		ENST00000364572 (Y_RNA.1-456) 17737458-17737556 misc_RNA
ENSG00000206881 (RNU6-190P)
RNA, U6 small nuclear 190, pseudogene 		ENST00000384154 (RNU6-190P-201) 17619533-17619634 snRNA
ENSG00000218359 (SUMO2P13)
SUMO2 pseudogene 13 		ENST00000403109 (SUMO2P13-001) 17582034-17582305 processed_pseudogene
ENSG00000219314 (RP1-273P12.1)
 ENST00000407586 (RP1-273P12.1-001) 17381367-17382120 processed_pseudogene
CIL_0009C9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm132 VISTA 10090 13:46271320-46874349
GeneTranscriptPositionBiotype
ENSMUSG00000021373 (Cap2)
CAP, adenylate cyclase-associated protein, 2 (yeast) 		ENSMUST00000021802 (Cap2-001) 46501848-46649642 protein_coding
ENSMUST00000119341 (Cap2-002) 46502125-46649635 protein_coding
ENSMUST00000126687 (Cap2-003) 46640058-46646572 processed_transcript
ENSMUSG00000021374 (Nup153)
nucleoporin 153 		ENSMUST00000021803 (Nup153-001) 46679905-46727940 protein_coding
ENSMUST00000182156 (Nup153-003) 46681075-46681952 retained_intron
ENSMUST00000182358 (Nup153-005) 46699649-46702130 retained_intron
ENSMUST00000182914 (Nup153-006) 46682845-46684014 retained_intron
ENSMUST00000183299 (Nup153-002) 46709911-46717267 processed_transcript
ENSMUSG00000021375 (Kif13a)
kinesin family member 13A 		ENSMUST00000056978 (Kif13a-201) 46749087-46929718 protein_coding
ENSMUSG00000038132 (Rbm24)
RNA binding motif protein 24 		ENSMUST00000037923 (Rbm24-201) 46418300-46431090 protein_coding
ENSMUSG00000063529 (Stmnd1)
stathmin domain containing 1 		ENSMUST00000076622 (Stmnd1-201) 46273721-46300115 protein_coding
ENSMUSG00000064558 (Gm24620)
predicted gene, 24620 		ENSMUST00000082624 (Gm24620-201) 46767520-46767649 snoRNA
ENSMUSG00000069237 (C78339)
expressed sequence C78339 		ENSMUST00000099547 (C78339-001) 46669522-46678056 protein_coding
ENSMUST00000150376 (C78339-002) 46671191-46673814 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0009C9_0001ENSG00000112183ENST00000318204ENST00000379052ENST00000425446ENST00000503965ENST00000508508ENST00000509686ENST00000510826ENSG00000112186ENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000489374ENST00000493172ENST00000611958ENST00000616440ENSG00000124789ENST00000262077ENST00000613258ENSG00000137177ENST00000259711ENST00000378814ENST00000378826ENST00000378843ENST00000502297ENSG00000137414ENST00000259963ENSG00000184612ENST00000333817ENSG00000201442ENST00000364572ENSG00000206881ENST00000384154ENSG00000218359ENST00000403109ENSG00000219314ENST00000407586CIL_0009C9_0002ENSMUSG00000021373ENSMUST00000021802ENSMUST00000119341ENSMUSG00000021374ENSMUST00000021803ENSMUST00000182914ENSMUSG00000021375ENSMUST00000056978ENSMUSG00000038132ENSMUST00000037923ENSMUSG00000063529ENSMUST00000076622ENSMUSG00000064558ENSMUST00000082624ENSMUSG00000069237ENSMUST00000099547ENSMUST00000150376
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000112183 ENST00000318204 0.130±0.00 N/A 0.256±0.00 1.293±0.00 N/A N/A 4.537±0.00 0.252±0.00 N/A N/A N/A N/A 0.080±0.00 N/A
ENST00000379052 0.474±0.00 N/A N/A 0.472±0.00 1.338±0.00 1.005±0.91 7.797±3.47 0.440±0.00 0.024±0.00 0.319±0.00 12.168±0.00 0.705±0.19 0.225±0.00 2.779±1.98
ENST00000425446 N/A N/A 0.154±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503965 N/A N/A N/A N/A N/A N/A N/A 0.647±0.00 N/A N/A N/A N/A N/A N/A
ENST00000504055 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508508 N/A N/A 0.135±0.00 0.778±0.00 N/A 1.667±1.14 9.771±0.00 N/A 0.818±0.75 1.343±0.00 27.676±0.00 0.940±0.35 0.027±0.00 N/A
ENST00000509686 0.596±0.00 N/A N/A 1.487±0.00 2.304±0.00 N/A 19.878±0.00 N/A N/A 1.605±0.00 40.090±0.00 0.860±0.00 0.367±0.00 2.923±0.00
ENST00000510826 N/A N/A N/A N/A 0.282±0.00 N/A N/A N/A N/A N/A N/A 1.663±0.00 0.263±0.00 5.572±0.00
ENSG00000112186 ENST00000229922 0.365±0.00 N/A N/A 18.701±0.00 3.959±2.74 0.907±0.00 4.762±0.73 1.888±0.00 1.727±1.65 0.655±0.00 25.410±8.92 2.575±0.00 2.705±0.61 0.630±0.42
ENST00000378990 0.257±0.00 3.391±0.00 N/A 29.931±0.00 3.142±2.81 12.464±0.00 14.123±0.00 N/A N/A N/A 91.042±0.00 1.017±0.73 0.886±0.00 2.738±2.53
ENST00000465994 0.704±0.00 N/A N/A 19.854±0.00 0.835±0.00 0.643±0.00 4.389±0.00 0.098±0.00 4.344±0.00 0.221±0.00 25.741±0.00 1.029±0.00 1.529±0.00 0.596±0.00
ENST00000476263 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A
ENST00000479291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A 0.971±0.00 N/A N/A
ENST00000493172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.374±0.00 1.609±0.00 N/A
ENST00000611958 0.295±0.00 2.438±0.00 0.392±0.00 27.471±0.00 6.899±0.00 12.238±0.00 14.950±0.00 1.801±1.50 0.508±0.00 1.542±0.00 112.204±0.00 2.282±0.00 1.575±0.03 4.154±0.00
ENST00000616440 N/A 0.676±0.00 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A
ENSG00000124789 ENST00000262077 7.464±0.00 4.699±0.00 3.915±0.00 4.582±0.36 6.522±1.67 4.871±0.37 3.227±2.30 3.534±1.39 4.212±2.55 4.911±0.43 7.134±3.29 7.982±1.45 6.389±0.39 16.422±0.12
ENST00000537253 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613258 N/A 1.155±0.00 N/A N/A 1.264±0.00 N/A N/A 1.122±0.00 N/A 3.297±0.00 N/A N/A N/A N/A
ENSG00000137177 ENST00000259711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.287±0.00 N/A
ENST00000358380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000378814 7.916±0.00 N/A N/A 2.626±1.67 2.341±0.00 4.061±3.13 N/A 2.877±0.00 0.465±0.00 2.323±1.25 N/A 3.319±1.99 N/A 5.340±0.00
ENST00000378826 N/A 1.713±0.00 N/A 1.058±0.00 1.155±0.00 N/A N/A 0.890±0.00 0.763±0.00 1.554±0.00 N/A 1.025±0.00 0.462±0.00 N/A
ENST00000378843 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.763±0.00
ENST00000502297 N/A 2.706±0.00 N/A N/A 6.889±0.00 4.902±0.00 N/A 1.547±0.00 2.075±0.00 3.582±0.00 2.757±0.00 3.444±0.05 1.390±0.01 5.677±0.00
ENST00000502704 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000503342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505588 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506044 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000137414 ENST00000259963 10.141±0.00 2.980±0.00 4.027±0.00 10.193±2.89 5.711±3.23 8.091±2.52 3.726±2.04 11.226±1.77 7.804±4.42 6.861±1.53 4.253±2.54 7.935±2.57 3.822±0.57 9.277±4.23
ENSG00000184612 ENST00000333817 0.065±0.00 0.139±0.00 N/A 0.190±0.00 0.170±0.00 0.100±0.00 0.087±0.07 0.104±0.00 0.786±0.00 N/A 0.485±0.09 0.231±0.11 0.094±0.00 N/A
ENSG00000201442 ENST00000364572 N/A N/A N/A 0.783±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206881 ENST00000384154 N/A N/A N/A N/A N/A 0.217±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000218359 ENST00000403109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.02 N/A 0.788±0.32
ENSG00000219314 ENST00000407586 N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021373 ENSMUST00000021802 7.161±5.99 0.653±0.24 44.505±3.56 6.658±5.45 4.664±4.38 3.629±0.87 27.840±3.14 0.671±0.23 0.325±0.19 4.083±1.44 61.239±6.70 5.800±2.49 0.684±0.75 6.675±0.84
ENSMUST00000119341 N/A N/A N/A 37.042±0.00 N/A N/A N/A N/A 0.024±0.00 N/A N/A 2.481±0.00 0.200±0.10 4.692±0.00
ENSMUST00000126687 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021374 ENSMUST00000021803 6.154±3.63 6.934±0.22 7.696±0.65 7.297±3.35 5.621±3.39 5.204±2.00 2.716±0.85 3.211±0.82 6.872±6.03 7.861±3.15 5.470±1.58 7.711±3.90 11.978±4.59 29.036±10.36
ENSMUST00000182156 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000182914 17.949±5.22 17.290±0.00 N/A N/A 24.904±5.55 16.307±2.57 7.764±1.14 10.322±2.07 6.387±0.63 23.546±5.50 N/A 35.998±5.91 N/A 72.939±2.88
ENSMUST00000183299 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000021375 ENSMUST00000056978 5.787±1.90 0.549±0.00 1.748±0.75 3.934±2.13 3.121±1.78 7.014±4.15 4.643±2.21 2.315±1.11 1.029±0.44 8.514±4.78 4.864±1.60 3.412±2.05 5.895±4.91 0.942±0.39
ENSMUSG00000038132 ENSMUST00000037923 7.803±7.85 5.271±0.42 13.989±1.10 2.121±0.84 6.011±6.48 1.772±0.55 55.009±7.92 0.495±0.02 0.040±0.04 3.169±0.91 50.869±4.86 5.965±3.98 0.068±0.09 0.193±0.08
ENSMUSG00000063529 ENSMUST00000076622 0.496±0.44 N/A 0.354±0.06 0.026±0.02 0.091±0.05 0.158±0.06 0.191±0.11 0.058±0.03 0.013±0.01 1.698±0.21 0.087±0.03 2.170±1.13 0.078±0.07 0.174±0.08
ENSMUSG00000064558 ENSMUST00000082624 N/A N/A N/A 18.817±0.00 N/A N/A N/A N/A N/A N/A 3.611±0.00 27.916±10.34 N/A N/A
ENSMUSG00000069237 ENSMUST00000099547 15.748±1.23 19.511±9.41 24.451±0.68 19.530±7.92 10.252±3.85 12.691±8.27 5.762±0.24 12.989±1.62 8.996±2.22 15.131±3.57 7.282±1.18 12.069±8.40 12.162±3.64 11.545±5.21
ENSMUST00000150376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 28.694±0.00

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