C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: polo-like kinase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076859 Plk3-001 ENSMUSG00000028680 10090 - 4:117128655-117133963 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076859
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076859 2.735±0.71 1.948±1.10 5.242±0.77 4.272±1.03 2.011±0.86 27.032±10.43 0.653±0.33 1.873±0.41 3.134±2.05 4.589±1.06 0.569±0.10 3.976±1.52 14.288±7.61 0.477±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093U CIL_00093U_0002 VISTA 4:117090982-117692314

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IEA G1/S transition of mitotic cell cycle
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0000302 IEA response to reactive oxygen species
GO:0002039 IEA p53 binding
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005795 IEA Golgi stack
GO:0005813 IEA centrosome
GO:0006468 IEA protein phosphorylation
GO:0006970 IEA response to osmotic stress
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0009314 IEA response to radiation
GO:0030425 IEA dendrite
GO:0031122 IEA cytoplasmic microtubule organization
GO:0032465 IEA regulation of cytokinesis
GO:0043025 IEA neuronal cell body
GO:0043066 IEA negative regulation of apoptotic process
GO:0051302 IEA regulation of cell division
GO:0090166 IEA Golgi disassembly
GO:0090316 IEA positive regulation of intracellular protein transport
GO:2000777 IEA positive regulation of proteasomal ubiquitin-dependent protein catabolic process involved in cellular response to hypoxia

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000339355 TCTEX1D4-001 protein_coding Homo_sapiens 8e-18 95
ENST00000372201 PLK3-001 protein_coding Homo_sapiens 0 2663
ENST00000461358 PLK3-006 processed_transcript Homo_sapiens 0 475
ENST00000461769 PLK3-005 processed_transcript Homo_sapiens 0 431
ENST00000465443 PLK3-002 processed_transcript Homo_sapiens 0 1816
ENST00000476731 PLK3-007 processed_transcript Homo_sapiens 0 640
ENST00000492398 PLK3-003 processed_transcript Homo_sapiens 0 634
ENST00000493100 PLK3-004 processed_transcript Homo_sapiens 0 331

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