C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: CDC28 protein kinase regulatory subunit 1B pseudogene 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000522230 CKS1BP7-001 ENSG00000254331 9606 - 8:80644939-80645173 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverLungOvaryENST00000522230
Transcript ID Brain Liver Lung Ovary
ENST00000522230 0.138±0.00 0.667±0.00 3.097±0.00 5.678±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001NF CIL_0001NF_0001 CGP 8:80485619-80874781
CIL_000088 CIL_000088_0002 CGP 8:80628451-81112068

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029679 Cks1b-001 protein_coding Mus_musculus 0 313
ENSMUST00000076896 Cks1brt-201 protein_coding Mus_musculus 0 302
ENSMUST00000183484 Cks1b-002 nonsense_mediated_decay Mus_musculus 0 239
ENSMUST00000107422 Cks1b-003 protein_coding Mus_musculus 0 239

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