C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GPN-loop GTPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076949 Gpn1-001 ENSMUSG00000064037 10090 + 5:31494741-31512903 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000076949
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000076949 5.729±0.57 4.516±0.80 4.204±0.33 8.881±2.39 4.059±1.22 2.795±0.30 4.238±0.31 4.701±0.47 3.575±1.70 4.538±0.58 3.816±0.91 6.382±1.09 5.241±1.82 2.404±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00013L CIL_00013L_0002 CGP 5:31485859-31512903
CIL_00013M CIL_00013M_0002 CGP 5:31494741-31527807

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000264718 GPN1-001 protein_coding Homo_sapiens 0 1256
ENST00000407583 GPN1-003 protein_coding Homo_sapiens 0 1146
ENST00000424214 GPN1-201 protein_coding Homo_sapiens 0 1149
ENST00000436280 GPN1-006 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000458167 GPN1-202 protein_coding Homo_sapiens 0 917
ENST00000461249 GPN1-004 processed_transcript Homo_sapiens 0 784
ENST00000478484 GPN1-007 retained_intron Homo_sapiens 0 252
ENST00000503738 GPN1-008 protein_coding Homo_sapiens 0 917
ENST00000515877 GPN1-009 protein_coding Homo_sapiens 0 1123
ENST00000610189 GPN1-010 protein_coding Homo_sapiens 0 1256
ENST00000616939 GPN1-203 protein_coding Homo_sapiens 0 1256

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