C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger and BTB domain containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077225 Zbtb18-201 ENSMUSG00000063659 10090 + 1:177445821-177450760 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLiverOvaryPlacentaENSMUST00000077225
Transcript ID Adipose Brain Breast Colon Liver Ovary Placenta
ENSMUST00000077225 0.590±0.01 1.781±0.10 0.358±0.00 0.595±0.00 0.501±0.09 1.343±0.55 0.407±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000838 CIL_000838_0002 VISTA 1:176850037-177451455
CIL_00092E CIL_00092E_0002 VISTA 1:176871230-177471899
CIL_0007JP CIL_0007JP_0002 UCNEbase 1:176929463-177459848
CIL_0006TV CIL_0006TV_0002 CGP 1:177020073-177450760
CIL_0008ST CIL_0008ST_0002 VISTA 1:177147324-177748425
CIL_0006TU CIL_0006TU_0002 CGP 1:177444661-177753324

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IDA negative regulation of transcription from RNA polymerase II promoter
GO:0001701 IMP in utero embryonic development
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0007519 IMP skeletal muscle tissue development
GO:0021549 IMP cerebellum development
GO:0021766 IMP hippocampus development
GO:0021987 IMP cerebral cortex development
GO:0043565 ISS sequence-specific DNA binding
GO:0045892 IDA negative regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding
GO:0048666 IMP neuron development
GO:0048872 IMP homeostasis of number of cells
GO:0051302 IMP regulation of cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000138312 zbtb18-001 protein_coding Danio_rerio 0 457
ENSDART00000113535 ZBTB42-201 protein_coding Danio_rerio 0 318
ENSDART00000153641 ZBTB42-001 protein_coding Danio_rerio 0 318
ENST00000358704 ZBTB18-001 protein_coding Homo_sapiens 0 5275
ENST00000622512 ZBTB18-201 protein_coding Homo_sapiens 0 5264

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