C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation initiation factor 2B, subunit 4 delta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077693 Eif2b4-001 ENSMUSG00000029145 10090 - 5:31187558-31193430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000077693
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000077693 10.969±1.52 11.157±3.40 7.051±1.75 7.969±0.00 13.967±3.54 6.891±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001DH CIL_0001DH_0002 CGP 5:31156005-31193430
CIL_000133 CIL_000133_0002 CGP 5:31187558-31198900

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001541 ISS ovarian follicle development
GO:0003743 ISS translation initiation factor activity
GO:0005085 IBA guanyl-nucleotide exchange factor activity
GO:0005737 ISS cytoplasm
GO:0005851 ISS eukaryotic translation initiation factor 2B complex
GO:0006413 ISS translational initiation
GO:0006446 IBA regulation of translational initiation
GO:0014003 ISS oligodendrocyte development
GO:0042552 ISS myelination
GO:0043547 ISS positive regulation of GTPase activity
GO:0045947 IBA negative regulation of translational initiation
GO:0051716 ISS cellular response to stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000347454 EIF2B4-001 protein_coding Homo_sapiens 0 1797
ENST00000405940 EIF2B4-004 nonsense_mediated_decay Homo_sapiens 0 1613
ENST00000417567 EIF2B4-008 nonsense_mediated_decay Homo_sapiens 0 520
ENST00000418146 EIF2B4-005 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000445933 EIF2B4-007 protein_coding Homo_sapiens 0 1779
ENST00000451130 EIF2B4-011 protein_coding Homo_sapiens 0 1736
ENST00000462749 EIF2B4-006 retained_intron Homo_sapiens 0 346
ENST00000475582 EIF2B4-003 retained_intron Homo_sapiens 0 390
ENST00000493344 EIF2B4-002 protein_coding Homo_sapiens 0 1727
ENST00000616081 EIF2B4-201 protein_coding Homo_sapiens 0 1773
ENST00000622434 EIF2B4-202 protein_coding Homo_sapiens 0 1724

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