C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nuclear receptor binding factor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000077839 Nrbf2-001 ENSMUSG00000075000 10090 - 10:67266689-67285305 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000077839
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000077839 6.669±0.72 16.976±6.58 9.331±0.37 5.135±0.90 7.039±2.82 6.058±2.84 2.095±0.15 4.339±0.64 5.893±1.67 5.020±0.50 6.516±1.00 7.025±2.49 7.585±1.28 1.356±0.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007NX CIL_0007NX_0002 UCNEbase 10:67256061-67368582

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003713 ISO transcription coactivator activity
GO:0005634 IEA nucleus
GO:0005667 ISO transcription factor complex
GO:0005737 IEA cytoplasm
GO:0006351 IEA transcription, DNA-templated
GO:0006357 ISO regulation of transcription from RNA polymerase II promoter
GO:0016922 ISO ligand-dependent nuclear receptor binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277746 NRBF2-001 protein_coding Homo_sapiens 0 1454
ENST00000413087 NRBF2P2-001 processed_pseudogene Homo_sapiens 0 773
ENST00000435510 NRBF2-201 protein_coding Homo_sapiens 0 1284
ENST00000587407 NRBF2P1-001 processed_pseudogene Homo_sapiens 0 656
ENST00000603087 NRBF2P5-001 processed_pseudogene Homo_sapiens 0 462
ENST00000611479 NRBF2-202 protein_coding Homo_sapiens 0 867

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