C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT and NTRK-like family, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078386 Slitrk6-201 ENSMUSG00000045871 10090 - 14:110748578-110755149 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078386
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078386 0.105±0.07 0.056±0.02 3.553±0.63 0.874±0.25 0.352±0.07 0.709±0.13 0.351±0.01 0.449±0.12 0.087±0.05 0.641±0.22 0.017±0.01 0.154±0.05 0.076±0.09 0.032±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EB CIL_0000EB_0002 CGP 14:108909991-110755149
CIL_0000EA CIL_0000EA_0002 CGP 14:110748578-111683134

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001964 IMP startle response
GO:0002088 IMP lens development in camera-type eye
GO:0002093 IMP auditory receptor cell morphogenesis
GO:0003674 ND molecular_function
GO:0005887 ISS integral component of plasma membrane
GO:0007409 IDA axonogenesis
GO:0007416 IMP synapse assembly
GO:0007601 IMP visual perception
GO:0007605 IEA sensory perception of sound
GO:0008344 IMP adult locomotory behavior
GO:0009986 ISO cell surface
GO:0016021 ISS integral component of membrane
GO:0021562 IMP vestibulocochlear nerve development
GO:0031223 IMP auditory behavior
GO:0035264 IMP multicellular organism growth
GO:0042472 IMP inner ear morphogenesis
GO:0043010 IMP camera-type eye development
GO:0048812 IMP neuron projection morphogenesis
GO:0060005 IMP vestibular reflex
GO:0060007 IMP linear vestibuloocular reflex
GO:0060384 IMP innervation
GO:0071944 IDA cell periphery
GO:0090102 IMP cochlea development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000400286 SLITRK6-001 protein_coding Homo_sapiens 0 3363

Loading