C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT and NTRK-like family, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400286 SLITRK6-001 ENSG00000184564 9606 - 13:85792790-85799488 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000400286
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000400286 0.014±0.00 0.022±0.00 0.011±0.00 0.051±0.04 0.609±0.45 1.954±0.57 0.136±0.11 0.582±0.48 3.242±3.20 1.502±0.20 0.083±0.03 0.230±0.16 0.285±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000EB CIL_0000EB_0001 CGP 13:83877205-85799488
CIL_0000EA CIL_0000EA_0001 CGP 13:85792790-87696272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001964 IEA startle response
GO:0002088 IEA lens development in camera-type eye
GO:0002093 IEA auditory receptor cell morphogenesis
GO:0005515 IEA protein binding
GO:0005887 IDA integral component of plasma membrane
GO:0007409 IEA axonogenesis
GO:0007416 IMP synapse assembly
GO:0007601 IEA visual perception
GO:0007605 IEA sensory perception of sound
GO:0008344 IEA adult locomotory behavior
GO:0009986 IDA cell surface
GO:0021562 IEA vestibulocochlear nerve development
GO:0031223 IEA auditory behavior
GO:0035264 IEA multicellular organism growth
GO:0042472 IEA inner ear morphogenesis
GO:0043010 IEA camera-type eye development
GO:0048812 IEA neuron projection morphogenesis
GO:0060005 IEA vestibular reflex
GO:0060007 IEA linear vestibuloocular reflex
GO:0060384 IEA innervation
GO:0071944 IEA cell periphery
GO:0090102 IEA cochlea development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078386 Slitrk6-201 protein_coding Mus_musculus 0 3363

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