C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: complement component 1, q subcomponent binding protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000078528 C1qbp-001 ENSMUSG00000018446 10090 - 11:70977836-70983026 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000078528
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000078528 25.834±2.12 660.174±148.23 44.150±16.47 57.648±18.18 79.918±56.86 64.898±40.05 43.872±7.00 62.827±24.32 63.698±28.98 36.229±19.90 41.504±3.22 176.180±134.35 112.393±111.94 16.140±5.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00060K CIL_00060K_0003 CGP 11:70970213-70983026
CIL_0000DD CIL_0000DD_0002 CGP 11:70977836-71004437

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001849 IEA complement component C1q binding
GO:0003714 IEA transcription corepressor activity
GO:0005080 IEA protein kinase C binding
GO:0005515 IEA protein binding
GO:0005540 IEA hyaluronic acid binding
GO:0005615 IEA extracellular space
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005759 IEA mitochondrial matrix
GO:0005829 IEA cytosol
GO:0008134 IEA transcription factor binding
GO:0009986 IEA cell surface
GO:0014065 IEA phosphatidylinositol 3-kinase signaling
GO:0016020 IEA membrane
GO:0030449 IEA regulation of complement activation
GO:0030984 IEA kininogen binding
GO:0031690 IEA adrenergic receptor binding
GO:0032689 IEA negative regulation of interferon-gamma production
GO:0032695 IEA negative regulation of interleukin-12 production
GO:0039534 IEA negative regulation of MDA-5 signaling pathway
GO:0039536 IEA negative regulation of RIG-I signaling pathway
GO:0042256 IEA mature ribosome assembly
GO:0043065 IEA positive regulation of apoptotic process
GO:0045785 IEA positive regulation of cell adhesion
GO:0048025 IEA negative regulation of mRNA splicing, via spliceosome
GO:0050687 IEA negative regulation of defense response to virus
GO:0051897 IEA positive regulation of protein kinase B signaling
GO:0090023 IEA positive regulation of neutrophil chemotaxis
GO:1900026 IEA positive regulation of substrate adhesion-dependent cell spreading
GO:1901165 IEA positive regulation of trophoblast cell migration
GO:2000510 IEA positive regulation of dendritic cell chemotaxis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000225698 C1QBP-001 protein_coding Homo_sapiens 0 870
ENST00000528754 RP11-658F2.3-001 processed_pseudogene Homo_sapiens 0 612
ENST00000570805 C1QBP-007 protein_coding Homo_sapiens 0 708
ENST00000574444 C1QBP-003 protein_coding Homo_sapiens 0 743

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