C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_00060K_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSDARG00000063021-ENSDARG00000039887 | CGP | 7955 | 5:3908754-3945032  |
|
| Gene | Transcript | Position | Biotype | |
ENSDARG00000039887  (c1qbp)complement component 1, q subcomponent binding protein |
ENSDART00000058346 (c1qbp-001)
|
3931672-3945032 | protein_coding | |
|
ENSDART00000142741 (c1qbp-002)
|
3940154-3944964 | retained_intron | ||
|
ENSDART00000146840 (c1qbp-003)
|
3931791-3944961 | protein_coding | ||
|
ENSDARG00000063021 (rpain) RPA interacting protein |
ENSDART00000091711 (rpain-201)
|
3908799-3926117 | protein_coding | |
|
ENSDART00000129329 (rpain-001)
|
3908754-3924803 | protein_coding | ||
|
ENSDART00000134396 (rpain-002)
|
3909820-3926118 | protein_coding | ||
| CIL_00060K_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000129197-ENSG00000108561 | CGP | 9606 | 17:5419641-5448830 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSG00000108559 (NUP88) nucleoporin 88kDa |
ENST00000225696 (NUP88-004)
|
5386102-5419466 | protein_coding | |
|
ENST00000570937 (NUP88-007)
|
5391475-5399633 | retained_intron | ||
|
ENST00000572019 (NUP88-009)
|
5416553-5419676 | processed_transcript | ||
|
ENST00000572290 (NUP88-005)
|
5414100-5419661 | nonsense_mediated_decay | ||
|
ENST00000572809 (NUP88-006)
|
5408737-5418229 | protein_coding | ||
|
ENST00000573169 (NUP88-014)
|
5360963-5386208 | processed_transcript | ||
|
ENST00000573584 (NUP88-001)
|
5386026-5420160 | protein_coding | ||
|
ENST00000574087 (NUP88-011)
|
5386687-5387912 | retained_intron | ||
|
ENST00000574855 (NUP88-012)
|
5386104-5387132 | retained_intron | ||
|
ENST00000574867 (NUP88-002)
|
5388376-5419662 | retained_intron | ||
|
ENST00000575976 (NUP88-008)
|
5387544-5388250 | retained_intron | ||
|
ENST00000576708 (NUP88-010)
|
5361814-5388850 | nonsense_mediated_decay | ||
|
ENST00000576862 (NUP88-013)
|
5387084-5394979 | retained_intron | ||
|
ENSG00000108561 (C1QBP) complement component 1, q subcomponent binding protein |
ENST00000225698 (C1QBP-001)
|
5432777-5439155 | protein_coding | |
|
ENST00000570805 (C1QBP-007)
|
5433019-5448830 | protein_coding | ||
|
ENST00000573204 (C1QBP-006)
|
5433072-5434110 | retained_intron | ||
|
ENST00000573406 (C1QBP-002)
|
5434665-5439155 | retained_intron | ||
|
ENST00000573421 (C1QBP-005)
|
5433143-5433853 | retained_intron | ||
|
ENST00000574444 (C1QBP-003)
|
5432801-5438778 | protein_coding | ||
|
ENST00000576122 (C1QBP-004)
|
5438167-5438767 | protein_coding | ||
| CIL_00060K_0003 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000018449-ENSMUSG00000018446 | CGP | 10090 | 11:70970213-70983026 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000018446 (C1qbp) complement component 1, q subcomponent binding protein |
ENSMUST00000078528 (C1qbp-001)
|
70977836-70983026 | protein_coding | |
|
ENSMUST00000155371 (C1qbp-002)
|
70977848-70978871 | retained_intron | ||
|
ENSMUST00000179291 (C1qbp-003)
|
70981010-70983007 | retained_intron | ||
|
ENSMUSG00000018449 (Rpain) RPA interacting protein |
ENSMUST00000018593 (Rpain-001)
|
70970213-70977833 | protein_coding | |
|
ENSMUST00000108529 (Rpain-011)
|
70970507-70977687 | protein_coding | ||
|
ENSMUST00000126815 (Rpain-007)
|
70970480-70974162 | retained_intron | ||
|
ENSMUST00000129531 (Rpain-004)
|
70970491-70973491 | retained_intron | ||
|
ENSMUST00000129540 (Rpain-006)
|
70974740-70977801 | retained_intron | ||
|
ENSMUST00000136665 (Rpain-005)
|
70970486-70972349 | retained_intron | ||
|
ENSMUST00000146788 (Rpain-002)
|
70972803-70977805 | retained_intron | ||
|
ENSMUST00000151608 (Rpain-008)
|
70970529-70974429 | retained_intron | ||
|
ENSMUST00000154430 (Rpain-003)
|
70970227-70971919 | nonsense_mediated_decay | ||
|
ENSMUST00000167509 (Rpain-013)
|
70970507-70977687 | protein_coding | ||
|
ENSMUST00000169965 (Rpain-012)
|
70970507-70977687 | protein_coding | ||
|
ENSMUST00000171254 (Rpain-009)
|
70970507-70977687 | nonsense_mediated_decay | ||
|
ENSMUST00000178822 (Rpain-010)
|
70970507-70977687 | protein_coding | ||
Expression Patterns
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