C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ring finger protein 183
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079420 Rnf183-201 ENSMUSG00000063851 10090 - 4:62427987-62428559 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000079420
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000079420 0.330±0.25 0.555±0.25 0.050±0.00 0.199±0.07 0.120±0.07 0.957±0.33 39.818±15.40 0.072±0.04 0.276±0.05 0.126±0.05 1.107±0.74 0.234±0.00 0.830±0.33

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004CQ CIL_0004CQ_0002 CGP 4:62408797-62435252
CIL_0004CS CIL_0004CS_0002 CGP 4:62427540-62470896

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000297894 RNF183-001 protein_coding Homo_sapiens 0 604
ENST00000416588 RNF183-004 protein_coding Homo_sapiens 0 604
ENST00000441031 RNF183-002 protein_coding Homo_sapiens 0 604
ENST00000478815 RNF183-005 protein_coding Homo_sapiens 0 604

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