C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 462
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000079605 Zfp462-004 ENSMUSG00000060206 10090 + 4:55011480-55081330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000079605
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000079605 1.296±0.49 1.941±0.45 1.171±0.17 7.583±2.64 1.164±0.32 0.838±0.27 1.577±0.41 0.065±0.03 0.800±0.38 1.846±1.10 1.010±0.30 2.603±3.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001JX CIL_0001JX_0002 CGP 4:53826045-55083563
CIL_00086Y CIL_00086Y_0002 VISTA 4:54351392-54953981
CIL_0001FS CIL_0001FS_0002 CGP 4:54945048-55392237

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005634 IDA nucleus
GO:0006325 IMP chromatin organization
GO:0043392 IDA negative regulation of DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277225 ZNF462-001 protein_coding Homo_sapiens 0 3236
ENST00000374686 ZNF462-002 protein_coding Homo_sapiens 0 5973
ENST00000427098 ZNF462-003 protein_coding Homo_sapiens 0 708
ENST00000441147 ZNF462-009 protein_coding Homo_sapiens 0 5991
ENST00000469433 ZNF462-004 processed_transcript Homo_sapiens 0 477
ENST00000471032 ZNF462-012 processed_transcript Homo_sapiens 0 377
ENST00000472574 ZNF462-010 protein_coding Homo_sapiens 2e-18 97
ENST00000479166 ZNF462-008 processed_transcript Homo_sapiens 0 682
ENST00000480607 ZNF462-011 processed_transcript Homo_sapiens 0 224
ENST00000482115 ZNF462-007 processed_transcript Homo_sapiens 0 761
ENST00000497489 ZNF462-005 processed_transcript Homo_sapiens 0 580

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