C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transmembrane protein 117
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000080141 Tmem117-201 ENSMUSG00000063296 10090 + 15:94629185-95096097 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000080141
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000080141 0.225±0.12 0.847±0.39 0.445±0.17 1.076±0.65 0.500±0.03 4.501±0.84 2.679±0.31 3.344±0.34 0.014±0.01 0.960±0.41 5.081±0.43 0.806±0.34 0.059±0.03 0.384±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006R8 CIL_0006R8_0002 CGP 15:94577951-95096097
CIL_0006R7 CIL_0006R7_0002 CGP 15:94629185-95528706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005783 IEA endoplasmic reticulum
GO:0008150 ND biological_process
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266534 TMEM117-001 protein_coding Homo_sapiens 0 2628
ENST00000546387 TMEM117-005 retained_intron Homo_sapiens 0 403
ENST00000546868 TMEM117-002 nonsense_mediated_decay Homo_sapiens 0 1921
ENST00000546978 TMEM117-003 processed_transcript Homo_sapiens 0 1635
ENST00000550495 TMEM117-006 protein_coding Homo_sapiens 0 623
ENST00000550623 TMEM117-007 processed_transcript Homo_sapiens 0 507
ENST00000551577 TMEM117-004 protein_coding Homo_sapiens 0 1458
ENST00000553253 TMEM117-008 processed_transcript Homo_sapiens 0 608

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