C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK2 associated, cullin domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081790 Cacul1-201 ENSMUSG00000033417 10090 - 19:60524696-60581023 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000081790
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000081790 5.673±0.97 3.589±1.93 4.878±1.20 5.395±2.18 4.505±0.55 3.283±1.55 3.477±0.28 7.823±0.82 5.760±1.39 5.285±0.32 6.392±0.22 4.029±1.83 10.713±4.65 9.174±2.86

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T8 CIL_0002T8_0002 CGP 19:60466733-60581023
CIL_00062M CIL_00062M_0002 CGP 19:60524696-60759913

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 ISS G1/S transition of mitotic cell cycle
GO:0005515 IEA protein binding
GO:0005575 ND cellular_component
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008284 ISS positive regulation of cell proliferation
GO:0019901 IEA protein kinase binding
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0045860 ISS positive regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369151 CACUL1-001 protein_coding Homo_sapiens 0 1552
ENST00000477583 CACUL1-004 retained_intron Homo_sapiens 0 451
ENST00000481360 CACUL1-005 retained_intron Homo_sapiens 0 363
ENST00000493518 CACUL1-002 nonsense_mediated_decay Homo_sapiens 0 1133
ENST00000544392 CACUL1-008 processed_transcript Homo_sapiens 0 833

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