C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDK2-associated, cullin domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000493518 CACUL1-002 ENSG00000151893 9606 - 10:118684556-118755249 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryTestisENST00000493518
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Testis
ENST00000493518 3.377±0.00 2.010±0.00 2.369±0.73 4.713±0.00 4.237±0.00 2.347±0.85 6.172±0.00 2.706±0.00 2.372±0.28 8.724±0.00 4.734±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002T8 CIL_0002T8_0001 CGP 10:118589989-118755249
CIL_00062M CIL_00062M_0001 CGP 10:118674167-119033732

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000082 IMP G1/S transition of mitotic cell cycle
GO:0005515 IPI protein binding
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0008284 IMP positive regulation of cell proliferation
GO:0019901 IPI protein kinase binding
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding
GO:0045860 IMP positive regulation of protein kinase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081790 Cacul1-201 protein_coding Mus_musculus 0 1133
ENSMUST00000111460 Cacul1-202 protein_coding Mus_musculus 0 977
ENSMUST00000166712 Cacul1-203 protein_coding Mus_musculus 0 977

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