C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 176
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081828 Ccdc176-001 ENSMUSG00000057265 10090 + 12:84409071-84433780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000081828
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000081828 6.611±0.00 6.785±0.00 0.762±0.00 90.327±141.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0002 VISTA 12:83875691-84476743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0036064 ISS ciliary basal body
GO:0044458 ISS motile cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000350259 ALDH6A1-002 protein_coding Homo_sapiens 9e-36 156
ENST00000394009 CCDC176-001 protein_coding Homo_sapiens 0 1740
ENST00000464394 CCDC176-005 protein_coding Homo_sapiens 0 494
ENST00000489323 CCDC176-006 processed_transcript Homo_sapiens 3.00004e-41 172
ENST00000492026 CCDC176-009 processed_transcript Homo_sapiens 0 806
ENST00000492247 CCDC176-008 retained_intron Homo_sapiens 0 222
ENST00000553458 ALDH6A1-001 protein_coding Homo_sapiens 3e-35 156
ENST00000554501 ALDH6A1-003 retained_intron Homo_sapiens 1e-35 156
ENST00000555126 ALDH6A1-007 protein_coding Homo_sapiens 7e-36 156

Loading