C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: aldehyde dehydrogenase 6 family, member A1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000553458 ALDH6A1-001 ENSG00000119711 9606 - 14:74056850-74084493 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000553458
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000553458 11.314±0.00 4.572±0.00 23.961±0.00 20.145±11.17 10.000±4.13 8.107±2.43 2.831±0.00 36.497±4.86 17.944±11.90 5.803±1.27 9.605±2.15 8.037±0.51 3.220±0.30 12.828±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000234 CIL_000234_0001 CGP 14:74056850-74201235

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000062 ISS fatty-acyl-CoA binding
GO:0004491 IEA:ISS methylmalonate-semialdehyde dehydrogenase (acylating) activity
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion
GO:0005759 TAS mitochondrial matrix
GO:0006210 IMP thymine catabolic process
GO:0006573 ISS valine metabolic process
GO:0006574 IMP valine catabolic process
GO:0008152 IEA metabolic process
GO:0009083 TAS branched-chain amino acid catabolic process
GO:0016491 IEA oxidoreductase activity
GO:0018478 ISS malonate-semialdehyde dehydrogenase (acetylating) activity
GO:0019859 ISS thymine metabolic process
GO:0034641 TAS cellular nitrogen compound metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0044822 IDA poly(A) RNA binding
GO:0050873 IEA brown fat cell differentiation
GO:0055114 IEA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085192 Aldh6a1-201 protein_coding Mus_musculus 0 2218
ENSDART00000075520 aldh6a1-001 protein_coding Danio_rerio 0 682
ENSMUST00000081828 Ccdc176-001 protein_coding Mus_musculus 3e-35 156
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.0000002 64

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