C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: coiled-coil domain containing 176
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000394009 CCDC176-001 ENSG00000119636 9606 + 14:74019356-74066092 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENST00000394009
Transcript ID Testis
ENST00000394009 33.824±14.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089E CIL_00089E_0001 VISTA 14:73441559-74042582
CIL_0002U9 CIL_0002U9_0002 CGP 14:73949926-74019399

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0036064 IEA:ISS ciliary basal body
GO:0044458 ISS motile cilium assembly

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000081828 Ccdc176-001 protein_coding Mus_musculus 0 1740
ENSMUST00000151789 Ccdc176-002 protein_coding Mus_musculus 0 390
ENSMUST00000153540 Ccdc176-003 nonsense_mediated_decay Mus_musculus 0 279
ENSMUST00000085192 Aldh6a1-201 protein_coding Mus_musculus 0 268
ENSDART00000075520 aldh6a1-001 protein_coding Danio_rerio 7e-29 134

Loading