C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: synapsin I
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000081893 Syn1-201 ENSMUSG00000037217 10090 - X:20860515-20920918 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainENSMUST00000081893
Transcript ID Brain
ENSMUST00000081893 75.768±63.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005GC CIL_0005GC_0002 CGP X:20797814-20921004
CIL_0006I4 CIL_0006I4_0002 CGP X:20860511-20921004

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003779 IEA actin binding
GO:0003824 IEA catalytic activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005794 IEA Golgi apparatus
GO:0005829 IEA cytosol
GO:0007269 IEA neurotransmitter secretion
GO:0008021 IEA synaptic vesicle
GO:0008152 IEA metabolic process
GO:0019901 IPI protein kinase binding
GO:0030054 IEA cell junction
GO:0030425 IEA dendrite
GO:0043229 IEA intracellular organelle
GO:0048172 TAS regulation of short-term neuronal synaptic plasticity
GO:0048306 IEA calcium-dependent protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000295987 SYN1-001 protein_coding Homo_sapiens 0 3421
ENST00000340666 SYN1-002 protein_coding Homo_sapiens 0 2553

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