C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: adaptor-related protein complex 3, beta 2 subunit
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082090 Ap3b2-001 ENSMUSG00000062444 10090 - 7:81460401-81493925 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082090 6.697±6.40 2.602±0.65 0.372±0.14 54.252±8.93 0.135±0.06 0.747±0.16 0.041±0.02 0.055±0.01 0.027±0.02 0.019±0.00 0.048±0.02 3.858±1.55 1.201±1.62 0.067±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GR CIL_0006GR_0002 CGP 7:81347026-81493925

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005802 TAS trans-Golgi network
GO:0006886 TAS intracellular protein transport
GO:0008089 IMP anterograde axon cargo transport
GO:0016192 TAS vesicle-mediated transport
GO:0030123 IEA AP-3 adaptor complex
GO:0031410 IEA cytoplasmic vesicle
GO:0048490 IMP anterograde synaptic vesicle transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261722 AP3B2-001 protein_coding Homo_sapiens 0 4039
ENST00000535348 AP3B2-003 protein_coding Homo_sapiens 0 3568
ENST00000535359 AP3B2-002 protein_coding Homo_sapiens 0 2560
ENST00000535385 AP3B2-010 retained_intron Homo_sapiens 0 366
ENST00000535513 AP3B2-005 retained_intron Homo_sapiens 0 477
ENST00000537735 AP3B2-009 retained_intron Homo_sapiens 0 651
ENST00000538592 AP3B2-012 nonsense_mediated_decay Homo_sapiens 0 191
ENST00000541693 AP3B2-011 protein_coding Homo_sapiens 0 802
ENST00000542200 AP3B2-004 protein_coding Homo_sapiens 0 479
ENST00000543938 AP3B2-008 retained_intron Homo_sapiens 0 2730
ENST00000545315 AP3B2-013 retained_intron Homo_sapiens 0 407
ENST00000559888 AP3B2-015 retained_intron Homo_sapiens 0 545
ENST00000561455 AP3B2-016 processed_transcript Homo_sapiens 0 327
ENST00000620652 AP3B2-201 protein_coding Homo_sapiens 0 4039

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