C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif-containing 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000082175 Trim68-201 ENSMUSG00000073968 10090 - 7:102677580-102687326 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000082175
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000082175 8.628±1.70 2.676±1.20 16.672±6.01 0.903±0.18 7.558±1.83 2.959±0.36 4.604±0.83 2.306±0.40 0.915±0.40 5.341±1.99 1.545±0.40 3.546±1.29 2.026±0.57 1.119±0.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LY CIL_0005LY_0002 CGP 7:102669901-102687326
CIL_00012P CIL_00012P_0002 CGP 7:102677580-102699272

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IEA ubiquitin-protein transferase activity
GO:0005634 IEA nucleus
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0008270 IEA zinc ion binding
GO:0035035 IEA histone acetyltransferase binding
GO:0050681 IEA androgen receptor binding
GO:0051865 IEA protein autoubiquitination
GO:0060765 IEA regulation of androgen receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000300747 TRIM68-001 protein_coding Homo_sapiens 0 1230
ENST00000315073 TRIM41-002 protein_coding Homo_sapiens 0.00002 57
ENST00000508930 TRIM41-003 retained_intron Homo_sapiens 0.00002 57
ENST00000510072 TRIM41-010 processed_transcript Homo_sapiens 0.000004 57
ENST00000515223 TRIM41-006 retained_intron Homo_sapiens 0.00003 57
ENST00000526337 TRIM68-006 protein_coding Homo_sapiens 0 520
ENST00000531101 TRIM68-003 nonsense_mediated_decay Homo_sapiens 0 1218

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