C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 68
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000300747 TRIM68-001 ENSG00000167333 9606 - 11:4598672-4608259 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000300747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000300747 1.085±0.00 1.010±0.00 0.270±0.00 0.899±0.43 1.159±0.61 0.574±0.22 0.311±0.00 5.259±0.00 1.126±0.29 0.514±0.05 1.214±0.00 1.900±0.91 1.406±0.42 2.701±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005LY CIL_0005LY_0001 CGP 11:4593750-4608259
CIL_00012P CIL_00012P_0001 CGP 11:4598672-4640838

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005794 IDA Golgi apparatus
GO:0008270 IEA zinc ion binding
GO:0016874 IEA ligase activity
GO:0035035 IPI histone acetyltransferase binding
GO:0046872 IEA metal ion binding
GO:0050681 IPI androgen receptor binding
GO:0051865 IDA protein autoubiquitination
GO:0060765 IDA regulation of androgen receptor signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082175 Trim68-201 protein_coding Mus_musculus 0 1230

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