C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAD2 mitotic arrest deficient-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084129 Mad2l2-001 ENSMUSG00000029003 10090 + 4:148130915-148145699 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084129
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084129 6.177±0.51 3.745±0.02 20.509±0.00 16.043±11.39 3.347±1.56 2.968±0.67 2.510±0.49 2.357±0.04 3.253±1.50 5.946±3.50 5.710±4.97 51.855±25.34

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087H CIL_00087H_0002 VISTA 4:147665245-148272946

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005819 ISS spindle
GO:0006351 IEA transcription, DNA-templated
GO:0007067 IEA mitotic nuclear division
GO:0008432 ISS JUN kinase binding
GO:0016035 ISS zeta DNA polymerase complex
GO:0033138 ISS positive regulation of peptidyl-serine phosphorylation
GO:0042772 ISS DNA damage response, signal transduction resulting in transcription
GO:0045893 ISS positive regulation of transcription, DNA-templated
GO:0060564 ISS negative regulation of mitotic anaphase-promoting complex activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000235310 MAD2L2-001 protein_coding Homo_sapiens 0 811
ENST00000376655 MAD2L2-005 retained_intron Homo_sapiens 0 318
ENST00000376664 MAD2L2-008 retained_intron Homo_sapiens 0 555
ENST00000376667 MAD2L2-003 protein_coding Homo_sapiens 0 811
ENST00000376669 MAD2L2-002 protein_coding Homo_sapiens 0 453
ENST00000376672 MAD2L2-004 protein_coding Homo_sapiens 0 453
ENST00000376692 MAD2L2-201 protein_coding Homo_sapiens 0 811
ENST00000456915 MAD2L2-006 protein_coding Homo_sapiens 0 641

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