C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming, acidic coiled-coil containing protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084512 Tacc1-202 ENSMUSG00000065954 10090 - 8:25154552-25201449 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084512
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084512 4.734±0.76 16.713±9.93 24.765±2.75 4.778±4.01 10.308±6.40 3.000±0.99 7.337±0.41 4.193±3.64 3.166±1.45 5.464±0.65 0.833±0.33 14.353±9.04 4.229±1.55 8.134±5.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D9 CIL_0008D9_0002 VISTA 8:25042689-25644335
CIL_0008H7 CIL_0008H7_0002 VISTA 8:25139932-25741457
CIL_0008SM CIL_0008SM_0002 VISTA 8:25140188-25742103

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000226 IMP microtubule cytoskeleton organization
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007049 IEA cell cycle
GO:0008283 IMP cell proliferation
GO:0019904 IPI protein domain specific binding
GO:0021987 IMP cerebral cortex development
GO:0022008 IMP neurogenesis
GO:0022027 IMP interkinetic nuclear migration
GO:0032886 IMP regulation of microtubule-based process
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000276520 TACC1-003 protein_coding Homo_sapiens 0 977
ENST00000317827 TACC1-001 protein_coding Homo_sapiens 0 977
ENST00000518415 TACC1-006 protein_coding Homo_sapiens 0 1096
ENST00000518809 TACC1-014 protein_coding Homo_sapiens 0 968
ENST00000519093 TACC1-011 retained_intron Homo_sapiens 0 654
ENST00000519416 TACC1-004 protein_coding Homo_sapiens 0 977
ENST00000520340 TACC1-026 protein_coding Homo_sapiens 0 448
ENST00000520611 TACC1-016 protein_coding Homo_sapiens 0 968
ENST00000520615 TACC1-002 protein_coding Homo_sapiens 0 977
ENST00000520973 TACC1-015 protein_coding Homo_sapiens 0 1096
ENST00000521568 TACC1-022 retained_intron Homo_sapiens 0 374
ENST00000521866 TACC1-033 protein_coding Homo_sapiens 0 1088
ENST00000522752 TACC1-009 processed_transcript Homo_sapiens 0 505
ENST00000522904 TACC1-031 protein_coding Homo_sapiens 0 327
ENST00000523239 TACC1-025 processed_transcript Homo_sapiens 0 267

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