C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transforming, acidic coiled-coil containing protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520615 TACC1-002 ENSG00000147526 9606 + 8:38728190-38850793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartLiverLungOvaryENST00000520615
Transcript ID Bladder Breast Colon Heart Liver Lung Ovary
ENST00000520615 3.019±0.00 7.894±0.00 4.048±0.00 2.068±0.00 16.693±0.00 11.390±0.00 5.097±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008NR CIL_0008NR_0001 VISTA 8:38140056-38746180
CIL_0008SM CIL_0008SM_0001 VISTA 8:38252496-38854674
CIL_0008H7 CIL_0008H7_0001 VISTA 8:38253282-38854976
CIL_0008D9 CIL_0008D9_0001 VISTA 8:38350004-38951124

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0007049 IEA cell cycle
GO:0015630 IDA microtubule cytoskeleton
GO:0045111 IDA intermediate filament cytoskeleton
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084030 Tacc1-201 protein_coding Mus_musculus 0 977
ENSMUST00000084512 Tacc1-202 protein_coding Mus_musculus 0 977
ENSMUST00000118379 Gm4994-001 processed_pseudogene Mus_musculus 0 628

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