C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: APC membrane recruitment 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084535 Amer1-001 ENSMUSG00000050332 10090 - X:95420318-95444872 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084535
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084535 4.319±1.00 2.016±0.21 3.690±0.05 2.519±1.39 2.458±0.26 1.314±0.20 0.842±0.12 1.040±0.09 0.942±0.25 2.739±0.19 1.147±0.68 3.032±0.82 1.126±0.44 0.372±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JJ CIL_0003JJ_0003 CGP X:95048935-95444872
CIL_0003JE CIL_0003JE_0003 CGP X:95420318-95478129

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0005515 IEA protein binding
GO:0005546 ISS phosphatidylinositol-4,5-bisphosphate binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005886 ISS plasma membrane
GO:0008013 ISS beta-catenin binding
GO:0016055 IEA Wnt signaling pathway
GO:0060348 IMP bone development
GO:0060612 IMP adipose tissue development
GO:0060828 ISS regulation of canonical Wnt signaling pathway
GO:0072161 IMP mesenchymal cell differentiation involved in kidney development
GO:0090090 ISS negative regulation of canonical Wnt signaling pathway
GO:0090263 ISS positive regulation of canonical Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000330258 AMER1-002 protein_coding Homo_sapiens 0 1694
ENST00000374869 AMER1-001 protein_coding Homo_sapiens 0 1173

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