C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: galactose-1-phosphate uridyl transferase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084695 Galt-001 ENSMUSG00000036073 10090 + 4:41755228-41758695 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084695 16.765±2.91 22.490±2.25 14.376±1.52 11.772±1.91 22.019±2.51 29.535±1.41 27.176±4.78 42.212±3.42 44.193±19.28 20.077±0.73 15.157±1.13 18.194±2.63 9.385±1.01 2.877±0.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005SN CIL_0005SN_0002 CGP 4:41723836-41756157
CIL_0004KU CIL_0004KU_0002 CGP 4:41738493-41758695

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IEA Golgi apparatus
GO:0006012 IEA galactose metabolic process
GO:0006258 IEA UDP-glucose catabolic process
GO:0008108 IDA UDP-glucose:hexose-1-phosphate uridylyltransferase activity
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000378842 GALT-002 protein_coding Homo_sapiens 0 1299
ENST00000450095 GALT-201 protein_coding Homo_sapiens 0 900
ENST00000465543 GALT-028 retained_intron Homo_sapiens 0 610
ENST00000468099 GALT-024 retained_intron Homo_sapiens 5.00264e-43 178
ENST00000472111 GALT-009 retained_intron Homo_sapiens 0 399
ENST00000473506 GALT-017 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000473529 GALT-006 retained_intron Homo_sapiens 0 412
ENST00000485531 GALT-004 retained_intron Homo_sapiens 0 215
ENST00000487381 GALT-005 retained_intron Homo_sapiens 0 399
ENST00000488412 GALT-008 processed_transcript Homo_sapiens 7e-29 132
ENST00000489643 GALT-010 retained_intron Homo_sapiens 0 313
ENST00000554085 GALT-016 nonsense_mediated_decay Homo_sapiens 0 953
ENST00000554139 GALT-019 retained_intron Homo_sapiens 0 401
ENST00000554330 GALT-026 retained_intron Homo_sapiens 0 211
ENST00000554550 GALT-014 nonsense_mediated_decay Homo_sapiens 0 900
ENST00000554638 GALT-007 retained_intron Homo_sapiens 0 900
ENST00000554897 GALT-018 nonsense_mediated_decay Homo_sapiens 0 298
ENST00000554944 GALT-013 retained_intron Homo_sapiens 0 298
ENST00000555020 GALT-011 retained_intron Homo_sapiens 0 401
ENST00000555086 GALT-015 retained_intron Homo_sapiens 0 889
ENST00000555214 GALT-020 retained_intron Homo_sapiens 0 300
ENST00000555754 GALT-027 retained_intron Homo_sapiens 0 326
ENST00000556157 GALT-022 retained_intron Homo_sapiens 0 254
ENST00000556244 GALT-023 nonsense_mediated_decay Homo_sapiens 0 682
ENST00000556278 GALT-001 protein_coding Homo_sapiens 0 298
ENST00000556403 GALT-025 retained_intron Homo_sapiens 0 287
ENST00000556494 GALT-021 retained_intron Homo_sapiens 0 433
ENST00000557541 GALT-003 processed_transcript Homo_sapiens 0 211
ENST00000557706 GALT-012 retained_intron Homo_sapiens 0 846

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