C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Region Summary |
| CIL_0005SN_0001 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSG00000205143-ENSG00000147955 | CGP | 9606 | 9:34621379-34637809  |
|
| Gene | Transcript | Position | Biotype | |
ENSG00000147955  (SIGMAR1)sigma non-opioid intracellular receptor 1 |
ENST00000277010 (SIGMAR1-001)
|
34634722-34637771 | protein_coding | |
|
ENST00000353468 (SIGMAR1-003)
|
34634722-34637744 | nonsense_mediated_decay | ||
|
ENST00000378892 (SIGMAR1-002)
|
34634722-34637732 | protein_coding | ||
|
ENST00000461426 (SIGMAR1-006)
|
34635497-34637796 | processed_transcript | ||
|
ENST00000477726 (SIGMAR1-008)
|
34635483-34637809 | protein_coding | ||
|
ENST00000478146 (SIGMAR1-005)
|
34636751-34637412 | processed_transcript | ||
|
ENST00000497006 (SIGMAR1-007)
|
34635810-34637683 | processed_transcript | ||
|
ENSG00000205143 (ARID3C) AT rich interactive domain 3C (BRIGHT-like) |
ENST00000378909 (ARID3C-002)
|
34621379-34628107 | protein_coding | |
| CIL_0005SN_0002 (Click to Hide/Show) |
| Source ID | Type | Tax ID | Position | |
|---|---|---|---|---|
| ENSMUSG00000066224-ENSMUSG00000036078 | CGP | 10090 | 4:41723836-41756157 |
|
| Gene | Transcript | Position | Biotype | |
|
ENSMUSG00000036073 (Galt) galactose-1-phosphate uridyl transferase |
ENSMUST00000084695 (Galt-001)
|
41755228-41758695 | protein_coding | |
|
ENSMUST00000108038 (Galt-002)
|
41755228-41758695 | protein_coding | ||
|
ENSMUST00000130698 (Galt-008)
|
41756210-41758695 | processed_transcript | ||
|
ENSMUST00000132760 (Galt-006)
|
41755758-41757480 | processed_transcript | ||
|
ENSMUST00000133106 (Galt-010)
|
41756262-41757778 | processed_transcript | ||
|
ENSMUST00000135734 (Galt-004)
|
41755253-41756447 | processed_transcript | ||
|
ENSMUST00000147719 (Galt-007)
|
41755961-41757480 | processed_transcript | ||
|
ENSMUST00000150908 (Galt-003)
|
41755840-41757272 | processed_transcript | ||
|
ENSMUST00000151490 (Galt-005)
|
41755253-41757549 | processed_transcript | ||
|
ENSMUST00000154275 (Galt-009)
|
41756254-41758238 | processed_transcript | ||
|
ENSMUSG00000036078 (Sigmar1) sigma non-opioid intracellular receptor 1 |
ENSMUST00000059354 (Sigmar1-001)
|
41738493-41741359 | protein_coding | |
|
ENSMUST00000071561 (Sigmar1-002)
|
41738493-41741359 | protein_coding | ||
|
ENSMUST00000123524 (Sigmar1-008)
|
41754828-41756157 | processed_transcript | ||
|
ENSMUST00000133590 (Sigmar1-004)
|
41739506-41755399 | processed_transcript | ||
|
ENSMUST00000142840 (Sigmar1-007)
|
41740449-41741186 | retained_intron | ||
|
ENSMUST00000146655 (Sigmar1-005)
|
41740603-41741320 | processed_transcript | ||
|
ENSMUST00000148223 (Sigmar1-003)
|
41739101-41745072 | processed_transcript | ||
|
ENSMUST00000149647 (Sigmar1-006)
|
41740581-41741048 | retained_intron | ||
|
ENSMUSG00000066224 (Arid3c) AT rich interactive domain 3C (BRIGHT-like) |
ENSMUST00000084698 (Arid3c-001)
|
41724139-41730286 | protein_coding | |
|
ENSMUST00000150809 (Arid3c-002)
|
41724139-41730286 | protein_coding | ||
|
ENSMUST00000159930 (Arid3c-003)
|
41729926-41731142 | protein_coding | ||
|
ENSMUST00000171251 (Arid3c-201)
|
41723836-41731142 | protein_coding | ||
Expression Patterns
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