C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphodiesterase 2A, cGMP-stimulated
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084894 Pde2a-201 ENSMUSG00000030653 10090 + 7:101421691-101512829 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084894
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084894 9.529±7.13 14.132±3.90 3.985±0.00 18.208±17.54 6.596±0.41 9.088±0.00 4.134±0.80 4.930±2.54 1.527±0.49 3.370±0.00 2.071±0.00 5.742±1.76 4.118±4.26 1.246±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XL CIL_0008XL_0002 VISTA 7:101413526-102014552

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004114 IEA 3',5'-cyclic-nucleotide phosphodiesterase activity
GO:0007165 IEA signal transduction
GO:0008152 IEA metabolic process
GO:0030424 IDA axon
GO:0030425 IDA dendrite
GO:0030823 IGI regulation of cGMP metabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000131089 PDE2A (2 of 2)-201 protein_coding Danio_rerio 0 344
ENST00000334456 PDE2A-001 protein_coding Homo_sapiens 0 3742
ENST00000376450 PDE2A-003 protein_coding Homo_sapiens 0 2492
ENST00000418754 PDE2A-010 protein_coding Homo_sapiens 0 2987
ENST00000420501 PDE2A-004 protein_coding Homo_sapiens 0 870
ENST00000441209 PDE2A-005 protein_coding Homo_sapiens 0 1118
ENST00000444035 PDE2A-201 protein_coding Homo_sapiens 0 3334
ENST00000475807 PDE2A-008 protein_coding Homo_sapiens 0 1090
ENST00000485058 PDE2A-007 processed_transcript Homo_sapiens 2e-22 110
ENST00000490749 PDE2A-006 retained_intron Homo_sapiens 2e-21 106
ENST00000535701 PDE2A-015 nonsense_mediated_decay Homo_sapiens 0 412
ENST00000536308 PDE2A-021 nonsense_mediated_decay Homo_sapiens 0 257
ENST00000536458 PDE2A-016 protein_coding Homo_sapiens 1e-18 97
ENST00000536918 PDE2A-027 retained_intron Homo_sapiens 0 555
ENST00000537631 PDE2A-020 nonsense_mediated_decay Homo_sapiens 0 294
ENST00000538299 PDE2A-024 protein_coding Homo_sapiens 0 597
ENST00000538749 PDE2A-017 protein_coding Homo_sapiens 0 339
ENST00000539367 PDE2A-002 nonsense_mediated_decay Homo_sapiens 0 2481
ENST00000540345 PDE2A-012 protein_coding Homo_sapiens 0 3358
ENST00000540380 PDE2A-013 processed_transcript Homo_sapiens 0 322
ENST00000541998 PDE2A-022 nonsense_mediated_decay Homo_sapiens 1e-17 97
ENST00000542223 PDE2A-025 protein_coding Homo_sapiens 0 797
ENST00000542969 PDE2A-009 protein_coding Homo_sapiens 0 416
ENST00000543575 PDE2A-023 nonsense_mediated_decay Homo_sapiens 1e-17 97
ENST00000543750 PDE2A-019 nonsense_mediated_decay Homo_sapiens 0 287
ENST00000544570 PDE2A-018 protein_coding Homo_sapiens 0 3411
ENST00000546038 PDE2A-014 nonsense_mediated_decay Homo_sapiens 0 320

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