C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085109 Ttc8-001 ENSMUSG00000021013 10090 + 12:98920574-98983232 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085109
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085109 6.382±1.77 3.607±0.66 7.512±1.25 5.522±2.07 3.302±0.32 0.814±0.38 0.772±0.17 6.775±1.45 1.264±0.32 3.051±0.81 1.035±0.26 5.249±1.47 2.002±0.72 4.869±1.88

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004KH CIL_0004KH_0002 CGP 12:98786604-98983238
CIL_0004KI CIL_0004KI_0002 CGP 12:98920574-99450111

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0005886 IEA plasma membrane
GO:0007411 IGI axon guidance
GO:0007608 IMP sensory perception of smell
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0021772 IMP olfactory bulb development
GO:0032391 IDA photoreceptor connecting cilium
GO:0032880 IMP regulation of protein localization
GO:0034464 IDA BBSome
GO:0035058 IEA nonmotile primary cilium assembly
GO:0035264 IMP multicellular organism growth
GO:0036064 ISO ciliary basal body
GO:0042384 IMP cilium assembly
GO:0045444 IEP fat cell differentiation
GO:0060219 IMP camera-type eye photoreceptor cell differentiation
GO:0061326 IMP renal tubule development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000338104 TTC8-005 protein_coding Homo_sapiens 0 1122
ENST00000345383 TTC8-201 protein_coding Homo_sapiens 0 1685
ENST00000346301 TTC8-006 protein_coding Homo_sapiens 0 1153
ENST00000354441 TTC8-007 protein_coding Homo_sapiens 0 743
ENST00000358622 TTC8-202 protein_coding Homo_sapiens 0 1783
ENST00000380656 TTC8-008 protein_coding Homo_sapiens 0 1685
ENST00000536576 TTC8-203 protein_coding Homo_sapiens 0 1153
ENST00000553718 TTC8-011 nonsense_mediated_decay Homo_sapiens 1.99965e-42 176
ENST00000554686 TTC8-010 protein_coding Homo_sapiens 0 952
ENST00000555057 TTC8-009 nonsense_mediated_decay Homo_sapiens 0 1783
ENST00000556077 TTC8-003 nonsense_mediated_decay Homo_sapiens 0 628
ENST00000556133 TTC8-014 retained_intron Homo_sapiens 0 228
ENST00000556567 TTC8-004 retained_intron Homo_sapiens 0 562
ENST00000556651 TTC8-012 protein_coding Homo_sapiens 0 708
ENST00000557580 TTC8-013 protein_coding Homo_sapiens 0 880
ENST00000614125 TTC8-204 protein_coding Homo_sapiens 0 1122
ENST00000622513 TTC8-001 protein_coding Homo_sapiens 0 1851

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