C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: grainyhead-like 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000085553 Grhl1-202 ENSMUSG00000020656 10090 + 12:24572287-24617387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000085553
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000085553 0.635±0.25 0.280±0.16 6.398±1.30 0.792±0.00 1.710±0.67 0.299±0.06 0.114±0.03 0.316±0.09 0.148±0.10 1.462±0.21 0.127±0.02 0.574±0.23 2.605±1.78 1.925±0.98

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001MN CIL_0001MN_0002 CGP 12:24498581-24617391
CIL_0007DG CIL_0007DG_0002 CGP 12:24572287-24662774

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 ISA regulation of transcription, DNA-templated
GO:0007275 IEA multicellular organismal development
GO:0043231 IEA intracellular membrane-bounded organelle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324907 GRHL1-001 protein_coding Homo_sapiens 0 2375
ENST00000405379 GRHL1-201 protein_coding Homo_sapiens 0 1290
ENST00000439493 GRHL1-004 nonsense_mediated_decay Homo_sapiens 0 508
ENST00000464418 GRHL1-003 nonsense_mediated_decay Homo_sapiens 0 1290
ENST00000472167 GRHL1-006 nonsense_mediated_decay Homo_sapiens 0 2193
ENST00000480736 GRHL1-005 protein_coding Homo_sapiens 0 436
ENST00000494520 GRHL1-007 retained_intron Homo_sapiens 0 848
ENST00000497403 GRHL1-002 retained_intron Homo_sapiens 0 889

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