C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: phosphatidylinositol transfer protein, membrane-associated 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086123 Pitpnm2-201 ENSMUSG00000029406 10090 - 5:124118690-124216418 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000086123
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000086123 3.345±0.57 9.913±3.15 2.990±0.00 10.004±5.68 5.937±1.41 1.436±0.34 1.524±0.45 3.286±1.36 8.004±2.95 2.174±0.96 8.875±3.39 4.676±3.01 1.313±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084E CIL_00084E_0002 VISTA 5:123871507-124476501
CIL_0002P7 CIL_0002P7_0002 CGP 5:124116089-124249760
CIL_0003J5 CIL_0003J5_0002 CGP 5:124118690-124327972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005543 ISA phospholipid binding
GO:0005622 IDA intracellular
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0006810 IEA transport
GO:0008150 ND biological_process
GO:0016020 IEA membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280562 PITPNM2-001 protein_coding Homo_sapiens 0 2004
ENST00000320201 PITPNM2-201 protein_coding Homo_sapiens 0 1984
ENST00000356404 PITPNM1-201 protein_coding Homo_sapiens 0 361
ENST00000436074 PITPNM2-009 retained_intron Homo_sapiens 0 573
ENST00000436757 PITPNM1-001 protein_coding Homo_sapiens 0 361
ENST00000451868 PITPNM2-002 processed_transcript Homo_sapiens 0 1234
ENST00000525568 PITPNM1-011 retained_intron Homo_sapiens 1e-22 110
ENST00000526450 PITPNM1-015 retained_intron Homo_sapiens 0 239
ENST00000527370 PITPNM1-003 retained_intron Homo_sapiens 0 361
ENST00000534749 PITPNM1-002 protein_coding Homo_sapiens 0 361
ENST00000542210 PITPNM2-007 protein_coding Homo_sapiens 0 228
ENST00000542749 PITPNM2-005 protein_coding Homo_sapiens 0 1962
ENST00000546049 PITPNM2-003 protein_coding Homo_sapiens 0 996

Loading