C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XVIIIb
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000086617 Myo18b-002 ENSMUSG00000072720 10090 - 5:112688876-112896362 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000086617
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000086617 0.109±0.08 0.030±0.00 0.514±0.03 0.148±0.00 2.799±0.13 0.109±0.05 13.860±1.71 0.075±0.06 0.011±0.01 0.705±0.59 42.550±3.95 0.079±0.03 0.225±0.10

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001570 IMP vasculogenesis
GO:0001701 IMP in utero embryonic development
GO:0003674 ND molecular_function
GO:0003774 IEA motor activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IEA myosin complex
GO:0030018 IDA Z disc
GO:0031941 IDA filamentous actin
GO:0048739 IMP cardiac muscle fiber development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000335473 MYO18B-001 protein_coding Homo_sapiens 0 4953
ENST00000407587 MYO18B-006 protein_coding Homo_sapiens 0 4939
ENST00000418374 MYO18B-005 retained_intron Homo_sapiens 0 4920
ENST00000536101 MYO18B-003 protein_coding Homo_sapiens 0 4944
ENST00000539302 MYO18B-002 nonsense_mediated_decay Homo_sapiens 0 3969

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