C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin XVIIIB
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000418374 MYO18B-005 ENSG00000133454 9606 + 22:25770027-26027766 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonLiverOvaryPlacentaTestisENST00000418374
Transcript ID Colon Liver Ovary Placenta Testis
ENST00000418374 0.033±0.00 0.003±0.00 0.041±0.00 0.123±0.05 1.456±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UJ CIL_0004UJ_0002 CGP 22:25564849-26031041

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000086617 Myo18b-002 protein_coding Mus_musculus 0 4920
ENSMUST00000183029 Myo18b-001 processed_transcript Mus_musculus 0 3426
ENSMUST00000183273 Myo18b-004 nonsense_mediated_decay Mus_musculus 0 2023
ENSDART00000129974 MYO18B (2 of 3)-201 protein_coding Danio_rerio 0.0000000003 73
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0.000009 58
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0.000009 58

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