C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exocyst complex component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087133 Exoc1-001 ENSMUSG00000036435 10090 + 5:76529311-76570294 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderColonKidneyLiverLungOvaryPlacentaTestisENSMUST00000087133
Transcript ID Adipose Bladder Colon Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000087133 2.040±0.38 2.488±0.42 0.931±0.32 2.442±0.72 2.005±0.95 1.532±0.14 2.706±0.72 3.687±0.71 2.378±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025E CIL_00025E_0002 CGP 5:76333495-76570294
CIL_00084Q CIL_00084Q_0002 VISTA 5:76362343-76966797
CIL_00025H CIL_00025H_0002 CGP 5:76529311-76646466

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005886 TAS plasma membrane
GO:0006887 IEA exocytosis
GO:0008150 ND biological_process
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000346134 EXOC1-001 protein_coding Homo_sapiens 0 3288
ENST00000349598 EXOC1-002 protein_coding Homo_sapiens 0 1677
ENST00000381295 EXOC1-003 protein_coding Homo_sapiens 0 3280
ENST00000504321 EXOC1-008 retained_intron Homo_sapiens 0 496
ENST00000505501 EXOC1-004 retained_intron Homo_sapiens 0 651
ENST00000506936 EXOC1-009 retained_intron Homo_sapiens 0 383
ENST00000509302 EXOC1-007 retained_intron Homo_sapiens 0 470
ENST00000511971 EXOC1-006 retained_intron Homo_sapiens 0 1413

Loading