C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: exocyst complex component 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000349598 EXOC1-002 ENSG00000090989 9606 + 4:55853739-55905034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000349598
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000349598 2.819±0.00 3.027±0.00 1.242±0.00 3.022±0.02 3.465±0.30 2.247±0.00 1.107±0.20 2.113±1.19 2.011±1.40 4.641±0.00 2.682±0.00 3.159±1.57 4.295±2.20 5.104±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025E CIL_00025E_0001 CGP 4:55595229-55905034
CIL_00084Q CIL_00084Q_0001 VISTA 4:55753423-56357627
CIL_00025H CIL_00025H_0001 CGP 4:55853616-56033363

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000145 NAS exocyst
GO:0005515 IPI protein binding
GO:0005886 TAS plasma membrane
GO:0006887 NAS exocytosis
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0044267 TAS cellular protein metabolic process
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049469 Exoc1-003 protein_coding Mus_musculus 0 3210
ENSMUST00000131470 Exoc1-004 processed_transcript Mus_musculus 0 1677
ENSMUST00000087133 Exoc1-001 protein_coding Mus_musculus 0 1677
ENSMUST00000113493 Exoc1-002 protein_coding Mus_musculus 0 1580
ENSMUST00000141884 Exoc1-007 retained_intron Mus_musculus 0 865
ENSMUST00000143489 Exoc1-008 retained_intron Mus_musculus 0 846
ENSMUST00000132807 Exoc1-011 retained_intron Mus_musculus 0 806
ENSMUST00000137018 Exoc1-006 retained_intron Mus_musculus 0 508
ENSMUST00000134521 Exoc1-010 protein_coding Mus_musculus 0 412
ENSMUST00000143736 Exoc1-009 retained_intron Mus_musculus 0 383
ENSMUST00000150829 Exoc1-005 retained_intron Mus_musculus 0 370

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