C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frequently rearranged in advanced T cell lymphomas
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087155 Frat1-201 ENSMUSG00000067199 10090 + 19:41830168-41830809 pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087155
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087155 2.463±1.32 0.293±0.00 1.215±0.00 4.443±1.26 7.469±3.21 0.720±0.25 0.312±0.17 1.561±0.11 1.221±0.00 0.431±0.19 4.935±1.86 0.498±0.36 42.938±1.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SO CIL_0008SO_0002 VISTA 19:41258217-41859329

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000371019 FRAT2-001 protein_coding Homo_sapiens 0 472
ENST00000371021 FRAT1-001 protein_coding Homo_sapiens 0 294

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