C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: frequently rearranged in advanced T-cell lymphomas 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000371019 FRAT2-001 ENSG00000181274 9606 - 10:97332497-97334709 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000371019
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000371019 4.420±0.00 4.932±0.00 0.565±0.00 4.603±0.00 2.473±0.00 4.009±0.00 1.875±1.33 2.963±0.00 1.753±0.00 1.798±0.00 0.852±0.00 10.428±8.57 10.028±1.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004I4 CIL_0004I4_0001 CGP 10:97332497-97426076

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0007275 NAS multicellular organismal development
GO:0008283 NAS cell proliferation
GO:0016055 IEA Wnt signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000059231 Frat2-201 protein_coding Mus_musculus 0 627
ENSMUST00000087155 Frat1-201 pseudogene Mus_musculus 0 472
ENSMUST00000094339 Peg12-201 protein_coding Mus_musculus 0 333

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