C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008SO_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs478 VISTA 9606 10:96654859-97255972
GeneTranscriptPositionBiotype
ENSG00000155629 (PIK3AP1)
phosphoinositide-3-kinase adaptor protein 1 		ENST00000339364 (PIK3AP1-001) 96593312-96720514 protein_coding
ENST00000371109 (PIK3AP1-004) 96595208-96633241 protein_coding
ENST00000371110 (PIK3AP1-002) 96594495-96669611 protein_coding
ENST00000467625 (PIK3AP1-006) 96595565-96618788 processed_transcript
ENST00000468783 (PIK3AP1-003) 96628398-96700878 processed_transcript
ENST00000489982 (PIK3AP1-007) 96603740-96620411 processed_transcript
ENSG00000155640 (C10orf12)
chromosome 10 open reading frame 12 		ENST00000286067 (C10orf12-001) 96981284-96986212 protein_coding
ENSG00000187122 (SLIT1)
slit homolog 1 (Drosophila) 		ENST00000266058 (SLIT1-001) 96998038-97185920 protein_coding
ENST00000314867 (SLIT1-006) 97037698-97185623 protein_coding
ENST00000371041 (SLIT1-004) 97057742-97185920 protein_coding
ENST00000371070 (SLIT1-003) 97001113-97185758 protein_coding
ENST00000456008 (SLIT1-009) 97157334-97185853 processed_transcript
ENST00000494968 (SLIT1-002) 96998120-96999666 processed_transcript
ENST00000497714 (SLIT1-008) 97065513-97102556 processed_transcript
ENSG00000196233 (LCOR)
ligand dependent nuclear receptor corepressor 		ENST00000356016 (LCOR-010) 96832955-96958891 protein_coding
ENST00000371097 (LCOR-009) 96832980-96958926 protein_coding
ENST00000371103 (LCOR-015) 96832282-96958933 protein_coding
ENST00000463415 (LCOR-012) 96949223-96958515 processed_transcript
ENST00000469510 (LCOR-013) 96907286-96908090 retained_intron
ENST00000493486 (LCOR-011) 96907285-96949126 processed_transcript
ENST00000498444 (LCOR-014) 96949142-96981043 processed_transcript
ENST00000540664 (LCOR-201) 96832260-96964431 protein_coding
ENSG00000213390 (ARHGAP19)
Rho GTPase activating protein 19 		ENST00000358308 (ARHGAP19-201) 97222176-97292673 protein_coding
ENST00000358531 (ARHGAP19-003) 97222173-97292656 protein_coding
ENST00000371027 (ARHGAP19-002) 97225309-97270664 protein_coding
ENST00000466484 (ARHGAP19-006) 97259430-97292635 protein_coding
ENST00000487035 (ARHGAP19-005) 97222180-97256515 processed_transcript
ENST00000492211 (ARHGAP19-004) 97222173-97292623 nonsense_mediated_decay
ENST00000493068 (ARHGAP19-007) 97265380-97292637 retained_intron
ENSG00000221465 (AL162502.1)
 ENST00000408538 (AL162502.1-201) 96920702-96920791 miRNA
ENSG00000231025 (RP11-175O19.4)
 ENST00000421806 (RP11-175O19.4-001) 96992450-96995959 antisense
ENSG00000232875 (HMGN2P35)
high mobility group nucleosomal binding domain 2 pseudogene 35 		ENST00000412164 (HMGN2P35-001) 96915633-96915902 processed_pseudogene
ENSG00000234855 (SLIT1-AS1)
SLIT1 antisense RNA 1 		ENST00000424428 (SLIT1-AS1-001) 97102756-97103747 antisense
ENSG00000236552 (RPL13AP5)
ribosomal protein L13a pseudogene 5 		ENST00000439189 (RPL13AP5-001) 96750288-96750899 processed_pseudogene
CIL_0008SO_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs478 VISTA 10090 19:41258217-41859329
GeneTranscriptPositionBiotype
ENSMUSG00000025016 (Tm9sf3)
transmembrane 9 superfamily member 3 		ENSMUST00000025989 (Tm9sf3-201) 41210842-41264004 protein_coding
ENSMUSG00000025017 (Pik3ap1)
phosphoinositide-3-kinase adaptor protein 1 		ENSMUST00000059672 (Pik3ap1-201) 41274218-41385070 protein_coding
ENSMUSG00000025019 (Lcor)
ligand dependent nuclear receptor corepressor 		ENSMUST00000067795 (Lcor-201) 41482645-41562246 protein_coding
ENSMUST00000163929 (Lcor-202) 41549639-41559781 protein_coding
ENSMUSG00000025020 (Slit1)
slit homolog 1 (Drosophila) 		ENSMUST00000025993 (Slit1-001) 41600259-41743665 protein_coding
ENSMUST00000166496 (Slit1-004) 41600451-41743492 protein_coding
ENSMUST00000169141 (Slit1-002) 41600257-41743492 protein_coding
ENSMUST00000169416 (Slit1-005) 41604369-41608530 retained_intron
ENSMUST00000171586 (Slit1-003) 41646103-41743486 protein_coding
ENSMUSG00000025154 (Arhgap19)
Rho GTPase activating protein 19 		ENSMUST00000026150 (Arhgap19-001) 41766588-41802047 protein_coding
ENSMUST00000163265 (Arhgap19-201) 41766591-41802084 protein_coding
ENSMUST00000176266 (Arhgap19-003) 41769800-41781336 protein_coding
ENSMUST00000177495 (Arhgap19-002) 41769994-41802047 protein_coding
ENSMUSG00000044065 (Gm9788)
predicted pseudogene 9788 		ENSMUST00000057038 (Gm9788-201) 41459813-41460718 processed_pseudogene
ENSMUSG00000047604 (Frat2)
frequently rearranged in advanced T cell lymphomas 2 		ENSMUST00000059231 (Frat2-201) 41845978-41848132 protein_coding
ENSMUSG00000067199 (Frat1)
frequently rearranged in advanced T cell lymphomas 		ENSMUST00000087155 (Frat1-201) 41830168-41830809 pseudogene
ENSMUSG00000074873 (AI606181)
expressed sequence AI606181 		ENSMUST00000099454 (AI606181-001) 41593363-41596158 protein_coding
ENSMUSG00000088220 (Gm22601)
predicted gene, 22601 		ENSMUST00000157595 (Gm22601-201) 41744804-41745053 misc_RNA
ENSMUSG00000090673 (Gm340)
predicted gene 340 		ENSMUST00000172371 (Gm340-201) 41582370-41586536 protein_coding
ENSMUSG00000098286 (Mir8091)
microRNA 8091 		ENSMUST00000183602 (Mir8091-201) 41588651-41588789 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SO_0001ENSG00000155629ENST00000339364ENST00000371109ENST00000371110ENST00000467625ENST00000468783ENST00000489982ENSG00000155640ENST00000286067ENSG00000187122ENST00000266058ENST00000314867ENST00000371041ENST00000371070ENST00000456008ENST00000494968ENST00000497714ENSG00000196233ENST00000356016ENST00000371097ENST00000371103ENST00000463415ENST00000469510ENST00000493486ENST00000498444ENST00000540664ENSG00000213390ENST00000358308ENST00000358531ENST00000371027ENST00000466484ENST00000487035ENST00000492211ENST00000493068ENSG00000221465ENST00000408538ENSG00000231025ENST00000421806ENSG00000232875ENST00000412164ENSG00000234855ENST00000424428ENSG00000236552ENST00000439189CIL_0008SO_0002ENSMUSG00000025016ENSMUST00000025989ENSMUSG00000025017ENSMUST00000059672ENSMUSG00000025019ENSMUST00000067795ENSMUST00000163929ENSMUSG00000025020ENSMUST00000025993ENSMUST00000166496ENSMUST00000169141ENSMUST00000169416ENSMUST00000171586ENSMUSG00000025154ENSMUST00000026150ENSMUST00000163265ENSMUST00000176266ENSMUST00000177495ENSMUSG00000044065ENSMUST00000057038ENSMUSG00000047604ENSMUST00000059231ENSMUSG00000067199ENSMUST00000087155ENSMUSG00000074873ENSMUST00000099454ENSMUSG00000088220ENSMUST00000157595ENSMUSG00000090673ENSMUST00000172371ENSMUSG00000098286ENSMUST00000183602
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008SO_0001ENSG00000155629ENST00000339364ENST00000371110ENST00000468783ENSG00000155640ENST00000286067ENSG00000187122ENST00000266058ENST00000314867ENSG00000196233ENST00000356016ENST00000371103ENST00000540664ENSG00000213390ENST00000358308ENST00000358531ENST00000371027ENST00000487035ENSG00000221465ENST00000408538ENSG00000231025ENST00000421806ENSG00000232875ENST00000412164ENSG00000234855ENST00000424428ENSG00000236552ENST00000439189CIL_0008SO_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000155629 ENST00000339364 2.026±0.00 2.993±0.00 N/A 0.336±0.25 0.630±0.00 0.630±0.00 0.241±0.15 4.538±2.21 3.836±3.46 3.125±1.82 0.237±0.00 1.910±1.57 4.417±0.94 N/A
ENST00000371109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371110 N/A N/A 1.738±0.00 0.152±0.00 2.085±0.00 N/A 0.711±0.00 4.778±0.00 1.025±0.00 3.337±0.00 0.173±0.00 2.196±0.00 N/A N/A
ENST00000467625 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000468783 N/A N/A N/A 0.906±0.00 N/A 0.633±0.00 N/A N/A N/A 2.640±0.00 N/A N/A 3.549±0.00 1.001±0.00
ENST00000489982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000155640 ENST00000286067 0.571±0.00 0.568±0.00 0.989±0.00 0.630±0.00 0.523±0.00 1.098±0.00 0.793±0.00 0.436±0.00 0.271±0.00 1.374±0.44 0.309±0.11 0.691±0.27 0.527±0.25 1.187±0.01
ENSG00000187122 ENST00000266058 N/A N/A N/A 5.727±1.20 N/A N/A N/A N/A N/A N/A N/A 2.279±0.00 N/A N/A
ENST00000314867 N/A N/A N/A 4.547±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000456008 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494968 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000196233 ENST00000356016 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.756±0.00 N/A N/A N/A
ENST00000371097 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371103 N/A N/A 1.904±0.00 N/A 2.407±0.00 2.256±0.00 0.741±0.00 N/A N/A N/A N/A N/A 0.433±0.00 N/A
ENST00000463415 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469510 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493486 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498444 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000540664 0.549±0.00 0.669±0.00 N/A 0.368±0.00 0.675±0.00 0.360±0.00 0.442±0.12 1.859±0.00 0.288±0.00 0.666±0.00 0.303±0.10 1.388±0.00 0.662±0.47 1.391±0.00
ENSG00000213390 ENST00000358308 N/A 1.387±0.00 N/A N/A N/A 0.461±0.00 N/A 0.274±0.00 N/A 0.906±0.02 0.403±0.00 N/A N/A N/A
ENST00000358531 1.351±0.00 N/A 0.102±0.00 N/A 1.029±0.00 0.502±0.00 0.410±0.25 0.830±0.32 0.726±0.16 0.943±0.12 N/A 1.366±0.80 0.799±0.24 4.917±0.43
ENST00000371027 N/A N/A N/A N/A 1.066±0.00 0.664±0.00 0.490±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000466484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487035 1.274±0.00 0.749±0.00 N/A 1.208±0.00 1.465±0.00 0.627±0.00 0.196±0.00 0.996±0.00 0.249±0.00 0.823±0.00 N/A 2.586±0.37 1.316±0.94 16.443±0.00
ENST00000492211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493068 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000221465 ENST00000408538 N/A 0.541±0.00 N/A 0.166±0.00 N/A N/A 0.568±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000231025 ENST00000421806 1.699±0.00 2.704±0.00 0.414±0.00 1.080±0.23 1.383±0.51 1.771±0.17 0.525±0.30 1.140±0.87 0.810±0.01 1.007±0.26 1.010±0.82 1.949±0.43 1.053±0.37 2.091±0.31
ENSG00000232875 ENST00000412164 0.059±0.00 0.128±0.00 N/A 0.262±0.00 1.476±0.00 N/A 0.124±0.00 N/A N/A 0.334±0.00 0.060±0.00 0.436±0.00 N/A 0.282±0.00
ENSG00000234855 ENST00000424428 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.685±0.23
ENSG00000236552 ENST00000439189 0.678±0.00 0.833±0.00 1.112±0.00 0.315±0.18 0.595±0.28 0.919±0.27 0.274±0.19 0.462±0.19 0.856±0.82 0.706±0.29 0.420±0.18 5.323±8.30 0.366±0.39 0.866±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000025016 ENSMUST00000025989 27.497±8.04 40.627±9.52 41.705±1.01 23.935±3.48 34.882±13.91 60.871±23.42 12.850±0.78 34.398±1.70 23.568±7.99 49.757±5.01 12.096±0.61 53.781±14.61 25.250±11.65 13.138±3.83
ENSMUSG00000025017 ENSMUST00000059672 1.924±0.00 1.915±0.42 N/A 0.781±0.00 3.381±0.43 1.072±0.53 0.438±0.00 0.756±0.00 5.130±0.68 5.386±0.74 0.073±0.03 3.099±2.31 1.821±0.77 0.738±0.32
ENSMUSG00000025019 ENSMUST00000067795 0.953±0.39 1.419±0.22 N/A 0.972±0.00 1.986±0.54 2.147±0.25 0.997±0.21 1.415±0.43 1.464±0.39 2.127±0.16 0.284±0.01 1.998±0.42 2.898±0.54 0.419±0.12
ENSMUST00000163929 N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A N/A 0.309±0.00 N/A N/A
ENSMUSG00000025020 ENSMUST00000025993 N/A 0.979±0.23 N/A 5.038±0.00 0.043±0.01 0.096±0.02 0.008±0.00 0.044±0.02 0.064±0.06 0.017±0.01 N/A 0.236±0.08 5.228±7.15 N/A
ENSMUST00000166496 0.045±0.00 N/A 0.016±0.00 4.058±0.00 0.047±0.02 N/A N/A 0.005±0.00 0.021±0.00 N/A N/A 0.096±0.05 26.017±0.00 0.650±0.00
ENSMUST00000169141 0.047±0.02 2.845±1.36 0.031±0.01 7.987±3.21 0.100±0.03 0.226±0.12 0.021±0.01 0.022±0.01 0.055±0.03 0.042±0.02 0.186±0.05 0.263±0.07 6.193±6.27 0.141±0.00
ENSMUST00000169416 N/A N/A N/A N/A N/A N/A N/A 0.113±0.00 0.147±0.00 N/A 0.358±0.00 N/A N/A N/A
ENSMUST00000171586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000025154 ENSMUST00000026150 1.057±0.50 1.128±0.00 0.682±0.21 2.108±1.39 1.192±0.24 0.803±0.55 0.570±0.25 0.593±0.13 13.490±8.62 1.364±0.03 1.674±0.40 3.438±1.80 3.975±2.62 20.098±5.57
ENSMUST00000163265 N/A 0.998±0.09 N/A N/A 1.378±0.66 1.047±0.26 0.169±0.00 0.510±0.00 0.774±0.21 N/A 0.933±0.82 3.483±1.91 0.188±0.00 N/A
ENSMUST00000176266 N/A 0.686±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177495 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000044065 ENSMUST00000057038 N/A N/A N/A N/A N/A N/A N/A 0.107±0.00 0.024±0.01 0.055±0.00 N/A 0.197±0.00 0.077±0.03 N/A
ENSMUSG00000047604 ENSMUST00000059231 1.718±0.00 N/A 1.084±0.23 5.465±2.09 2.083±0.54 21.963±2.08 0.687±0.19 0.605±0.15 3.669±2.56 1.831±0.18 4.841±0.46 5.803±1.07 1.554±0.37 27.988±10.65
ENSMUSG00000067199 ENSMUST00000087155 N/A 2.463±1.32 0.293±0.00 1.215±0.00 4.443±1.26 7.469±3.21 0.720±0.25 0.312±0.17 1.561±0.11 1.221±0.00 0.431±0.19 4.935±1.86 0.498±0.36 42.938±1.80
ENSMUSG00000074873 ENSMUST00000099454 2.138±0.59 1.465±0.20 1.812±0.00 1.507±0.00 2.388±0.32 1.857±0.39 1.319±0.17 1.878±0.15 1.055±0.34 2.375±0.21 0.565±0.07 1.594±0.42 2.395±0.57 0.375±0.16
ENSMUSG00000088220 ENSMUST00000157595 N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00 N/A N/A N/A 1.627±0.00 N/A
ENSMUSG00000090673 ENSMUST00000172371 N/A N/A N/A 1.696±0.00 N/A N/A 0.380±0.00 N/A 0.407±0.14 N/A 0.306±0.11 1.480±1.11 5.690±2.16 0.802±0.34
ENSMUSG00000098286 ENSMUST00000183602 N/A N/A N/A 4.196±0.00 N/A N/A N/A N/A N/A N/A N/A 13.786±5.47 5.941±2.18 3.784±0.00

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