C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: guanine deaminase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000087600 Gda-001 ENSMUSG00000058624 10090 - 19:21391307-21472672 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087600
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087600 6.929±1.74 1.721±0.41 4.487±1.21 7.205±9.99 5.217±1.62 4.543±1.61 1.791±0.82 0.823±0.11 2.231±1.34 2.773±0.20 0.906±0.45 1.093±0.44 0.760±0.76 0.364±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QU CIL_0007QU_0002 VISTA 19:20974084-21574843
CIL_0000W3 CIL_0000W3_0002 CGP 19:21272278-21473445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006147 IEA guanine catabolic process
GO:0008270 IEA zinc ion binding
GO:0008892 IEA guanine deaminase activity
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000238018 GDA-201 protein_coding Homo_sapiens 0 1703
ENST00000358399 GDA-001 protein_coding Homo_sapiens 0 1921
ENST00000376986 GDA-002 protein_coding Homo_sapiens 0 839
ENST00000436438 GDA-004 protein_coding Homo_sapiens 0 651
ENST00000475764 GDA-005 nonsense_mediated_decay Homo_sapiens 0 1687
ENST00000489618 GDA-003 nonsense_mediated_decay Homo_sapiens 0 713
ENST00000545168 GDA-202 protein_coding Homo_sapiens 0 1714

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