C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007QU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm269 VISTA 9606 9:72062282-72663099
GeneTranscriptPositionBiotype
ENSG00000107372 (ZFAND5)
zinc finger, AN1-type domain 5 		ENST00000237937 (ZFAND5-201) 72351425-72364592 protein_coding
ENST00000343431 (ZFAND5-004) 72355833-72364626 protein_coding
ENST00000376956 (ZFAND5-003) 72356946-72364664 protein_coding
ENST00000376960 (ZFAND5-001) 72354458-72365235 protein_coding
ENST00000376962 (ZFAND5-002) 72354458-72365197 protein_coding
ENST00000471197 (ZFAND5-006) 72355955-72360285 processed_transcript
ENST00000487330 (ZFAND5-005) 72360438-72364976 processed_transcript
ENST00000488164 (ZFAND5-007) 72354458-72364346 processed_transcript
ENSG00000165091 (TMC1)
transmembrane channel-like 1 		ENST00000297784 (TMC1-001) 72521801-72836351 protein_coding
ENST00000340019 (TMC1-201) 72616266-72836351 protein_coding
ENST00000469455 (TMC1-005) 72808883-72830519 processed_transcript
ENST00000486417 (TMC1-002) 72792038-72836320 processed_transcript
ENST00000492418 (TMC1-004) 72628025-72651618 processed_transcript
ENST00000497073 (TMC1-003) 72577788-72628344 processed_transcript
ENSG00000204669 (C9orf57)
chromosome 9 open reading frame 57 		ENST00000377024 (C9orf57-001) 72051376-72060605 protein_coding
ENST00000424431 (C9orf57-201) 72051383-72072721 protein_coding
ENSG00000224820 (BTF3P4)
basic transcription factor 3 pseudogene 4 		ENST00000418852 (BTF3P4-001) 72107818-72108312 processed_pseudogene
ENSG00000225434 (LINC01504)
long intergenic non-protein coding RNA 1504 		ENST00000436054 (LINC01504-001) 72305436-72343210 lincRNA
ENST00000451152 (LINC01504-003) 72305517-72315464 lincRNA
ENST00000451596 (LINC01504-002) 72305430-72315464 lincRNA
ENSG00000225947 (RP11-313E4.1)
 ENST00000415024 (RP11-313E4.1-001) 72470374-72471076 processed_pseudogene
ENSG00000230003 (RP11-217F16.1)
 ENST00000431784 (RP11-217F16.1-001) 72445754-72445969 processed_pseudogene
ENSG00000233933 (RP11-63P12.2)
 ENST00000446146 (RP11-63P12.2-001) 72275453-72275973 processed_pseudogene
ENSG00000235523 (RP11-63P12.7)
 ENST00000427901 (RP11-63P12.7-001) 72257336-72257783 lincRNA
ENSG00000236862 (RPS20P24)
ribosomal protein S20 pseudogene 24 		ENST00000457473 (RPS20P24-001) 72655832-72656192 processed_pseudogene
CIL_0007QU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm269 VISTA 10090 19:20974084-21574843
GeneTranscriptPositionBiotype
ENSMUSG00000024750 (Zfand5)
zinc finger, AN1-type domain 5 		ENSMUST00000025659 (Zfand5-001) 21272278-21282289 protein_coding
ENSMUST00000133175 (Zfand5-003) 21276040-21280971 retained_intron
ENSMUST00000141568 (Zfand5-002) 21275980-21280664 retained_intron
ENSMUST00000149144 (Zfand5-005) 21272687-21280433 nonsense_mediated_decay
ENSMUST00000152338 (Zfand5-004) 21273246-21277038 protein_coding
ENSMUSG00000058624 (Gda)
guanine deaminase 		ENSMUST00000087600 (Gda-001) 21391307-21472672 protein_coding
ENSMUST00000121725 (Gda-003) 21394038-21473445 protein_coding
ENSMUST00000136258 (Gda-002) 21418725-21472588 retained_intron
ENSMUSG00000079382 (Gm3443)
predicted gene 3443 		ENSMUST00000112772 (Gm3443-201) 21555674-21557657 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QU_0001ENSG00000107372ENST00000237937ENST00000343431ENST00000376956ENST00000376960ENST00000376962ENST00000471197ENST00000487330ENST00000488164ENSG00000165091ENST00000297784ENST00000340019ENST00000469455ENST00000486417ENST00000492418ENST00000497073ENSG00000204669ENST00000377024ENST00000424431ENSG00000224820ENST00000418852ENSG00000225434ENST00000436054ENST00000451152ENST00000451596ENSG00000225947ENST00000415024ENSG00000230003ENST00000431784ENSG00000233933ENST00000446146ENSG00000235523ENST00000427901ENSG00000236862ENST00000457473CIL_0007QU_0002ENSMUSG00000024750ENSMUST00000025659ENSMUST00000133175ENSMUST00000141568ENSMUST00000149144ENSMUST00000152338ENSMUSG00000058624ENSMUST00000087600ENSMUST00000121725ENSMUST00000136258ENSMUSG00000079382ENSMUST00000112772
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007QU_0001ENSG00000107372ENST00000237937ENST00000343431ENST00000376960ENST00000376962ENST00000488164ENSG00000165091ENST00000297784ENST00000340019ENST00000469455ENST00000486417ENST00000492418ENST00000497073ENSG00000204669ENST00000377024ENST00000424431ENSG00000224820ENST00000418852ENSG00000225434ENST00000436054ENST00000451152ENST00000451596ENSG00000225947ENST00000415024ENSG00000230003ENST00000431784ENSG00000233933ENST00000446146ENSG00000235523ENST00000427901ENSG00000236862ENST00000457473CIL_0007QU_0002ENSMUSG00000024750ENSMUST00000025659ENSMUST00000133175ENSMUST00000141568ENSMUST00000149144ENSMUSG00000058624ENSMUST00000087600ENSMUST00000121725ENSMUST00000136258ENSMUSG00000079382ENSMUST00000112772
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000107372 ENST00000237937 N/A N/A N/A 2.886±0.00 N/A N/A 4.636±0.00 7.142±0.00 5.034±0.00 N/A 15.498±0.00 3.606±0.00 2.644±0.00 N/A
ENST00000343431 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 14.206±0.00
ENST00000376956 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000376960 155.663±0.00 33.501±0.00 N/A 41.617±35.43 25.438±17.42 28.061±22.32 46.519±0.00 27.196±20.70 12.683±2.95 69.078±0.00 82.570±74.58 35.393±9.02 21.512±9.34 46.059±16.49
ENST00000376962 N/A 7.386±0.00 2.184±0.00 17.393±1.30 6.801±3.41 8.437±5.82 10.928±7.38 14.903±7.45 6.967±1.50 N/A 32.272±24.00 10.144±0.00 17.617±0.92 13.838±7.57
ENST00000471197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000487330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000488164 N/A N/A 4.834±0.00 N/A 2.471±0.00 1.663±0.00 3.683±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000165091 ENST00000297784 0.022±0.00 0.039±0.00 N/A 0.102±0.00 0.038±0.00 0.035±0.00 N/A 0.053±0.00 N/A N/A N/A 0.018±0.00 0.117±0.00 0.316±0.00
ENST00000340019 N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A N/A N/A N/A 0.040±0.02 0.030±0.00 N/A
ENST00000469455 N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.446±0.00 N/A N/A N/A 0.061±0.00 0.308±0.12 N/A
ENST00000486417 N/A N/A 0.091±0.00 N/A N/A N/A N/A 0.066±0.00 N/A N/A N/A 0.052±0.00 0.165±0.03 0.099±0.00
ENST00000492418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.149±0.00 N/A N/A
ENST00000497073 0.124±0.00 N/A N/A N/A 0.304±0.00 N/A N/A 0.184±0.00 N/A N/A N/A 0.191±0.09 N/A 0.151±0.00
ENSG00000204669 ENST00000377024 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.302±0.53
ENST00000424431 N/A N/A N/A 0.009±0.00 0.009±0.00 N/A N/A N/A 0.015±0.00 N/A N/A 0.038±0.02 N/A 0.907±0.00
ENSG00000224820 ENST00000418852 0.085±0.00 0.214±0.00 N/A 0.031±0.00 0.031±0.00 0.284±0.00 0.084±0.00 N/A N/A 0.030±0.00 0.189±0.00 0.094±0.00 N/A 0.078±0.03
ENSG00000225434 ENST00000436054 0.034±0.00 0.063±0.00 N/A 0.034±0.00 0.185±0.08 0.381±0.28 0.116±0.05 0.215±0.17 0.141±0.00 0.986±0.00 0.224±0.00 0.355±0.07 0.124±0.06 0.052±0.00
ENST00000451152 0.057±0.00 0.074±0.00 1.076±0.00 N/A 0.255±0.00 N/A N/A N/A 0.222±0.17 0.602±0.58 N/A 0.604±0.42 0.418±0.26 N/A
ENST00000451596 N/A N/A N/A N/A 0.318±0.00 0.771±0.00 0.351±0.00 N/A N/A N/A N/A 0.493±0.02 0.092±0.00 0.365±0.00
ENSG00000225947 ENST00000415024 N/A N/A N/A N/A N/A 0.033±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000230003 ENST00000431784 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.224±0.00
ENSG00000233933 ENST00000446146 N/A N/A N/A 0.048±0.00 N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000235523 ENST00000427901 N/A 0.440±0.00 1.625±0.00 0.436±0.00 0.116±0.00 N/A 0.100±0.00 1.385±0.00 0.280±0.00 N/A N/A 0.602±0.23 N/A 0.152±0.00
ENSG00000236862 ENST00000457473 0.296±0.00 0.198±0.00 N/A 0.078±0.00 0.273±0.00 0.218±0.00 0.103±0.00 N/A N/A 0.037±0.00 0.102±0.00 0.338±0.00 N/A 0.138±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024750 ENSMUST00000025659 16.346±6.37 168.755±37.20 36.133±1.01 31.548±9.04 36.161±16.22 50.210±7.38 20.282±1.49 13.746±3.24 14.191±2.44 40.089±10.42 70.737±13.12 67.175±29.57 27.150±1.50 4.438±0.98
ENSMUST00000133175 N/A N/A N/A N/A N/A N/A N/A N/A 1.303±0.00 N/A N/A 2.381±0.06 N/A N/A
ENSMUST00000141568 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.692±0.00
ENSMUST00000149144 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 10.131±0.00
ENSMUST00000152338 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000058624 ENSMUST00000087600 6.929±1.74 1.721±0.41 4.487±1.21 7.205±9.99 5.217±1.62 4.543±1.61 1.791±0.82 0.823±0.11 2.231±1.34 2.773±0.20 0.906±0.45 1.093±0.44 0.760±0.76 0.364±0.06
ENSMUST00000121725 2.197±0.75 N/A N/A 0.196±0.00 4.056±0.00 N/A 0.542±0.00 N/A 0.198±0.00 N/A N/A 0.767±0.00 0.253±0.00 0.188±0.05
ENSMUST00000136258 N/A 10.817±1.03 N/A N/A 8.324±1.13 7.718±1.23 N/A N/A 1.229±0.25 2.590±1.00 N/A 2.845±1.88 N/A 0.378±0.00
ENSMUSG00000079382 ENSMUST00000112772 N/A N/A N/A 0.975±0.00 N/A N/A N/A N/A N/A N/A N/A 0.340±0.00 0.181±0.14 15.314±24.04

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