C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: guanine deaminase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358399 GDA-001 ENSG00000119125 9606 + 9:72149467-72252224 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358399
Transcript ID Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358399 5.686±0.00 19.580±2.34 0.433±0.11 0.104±0.00 8.790±1.20 1.918±1.69 0.110±0.00 0.115±0.04 8.329±9.16 0.532±0.00 0.365±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007QU CIL_0007QU_0001 VISTA 9:72062282-72663099

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 TAS intracellular
GO:0005829 TAS cytosol
GO:0006139 TAS nucleobase-containing compound metabolic process
GO:0006144 TAS purine nucleobase metabolic process
GO:0006147 IEA guanine catabolic process
GO:0006195 TAS purine nucleotide catabolic process
GO:0007399 TAS nervous system development
GO:0008270 IEA zinc ion binding
GO:0008892 EXP:IEA guanine deaminase activity
GO:0016787 IEA hydrolase activity
GO:0044281 TAS small molecule metabolic process
GO:0055086 TAS nucleobase-containing small molecule metabolic process
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087600 Gda-001 protein_coding Mus_musculus 0 1921
ENSMUST00000121725 Gda-003 protein_coding Mus_musculus 0 1714
ENSMUST00000136258 Gda-002 retained_intron Mus_musculus 0 743

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